Protein Concepts Dictionary

Tableau information

Concept source:  d4infc_  amino acid (a.a.) range (LEU14)(ASN158)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EHHHHEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LEU14)   (ARG25) E1
	   (ARG25)   (ARG36) H2
	   (ASP41)   (SER54) H3
	   (SER56)   (ASP68) H4
	   (GLY70)   (GLY81) H5
	   (ASP83)   (LEU89) E6
	   (ASP99)  (TYR121) H7
	  (ILE126)  (ALA132) E8
	  (PRO136)  (ARG148) H9
	  (GLY154)  (ASN158) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
H2      -52.9°   H2                                                             
H3      -94.2° -121.3°   H3                                                      
H4      -96.9°  133.7°  -91.5°   H4                                               
H5      151.7°  102.8°   87.2° -111.4°   H5                                        
E6      -34.1°   38.0° -128.2°  -96.5°  134.8°   E6                                 
H7      135.8° -150.8°   43.8°   75.5°  -57.8°  167.3°   H7                          
E8      -40.4°   33.1° -133.8° -100.6°  127.3°   -7.6° -174.8°   E8                   
H9      128.6° -160.1°   42.9°   65.4°  -68.6°  156.2°  -11.7°  163.2°   H9            
E10     -54.4°  -21.2°  100.8° -149.2°   97.5°  -53.8°  131.8°  -51.1°  139.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4infb_ :    (LEU14)  (ASN158)   [view usage] : c.1.9.0 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |automated matches |automated matches |Novosphingobium aromaticivorans [TaxId: 279238]
 d4infa_ :    (LEU14)  (ASN158)   [view usage] : c.1.9.0 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |automated matches |automated matches |Novosphingobium aromaticivorans [TaxId: 279238]
 d4qrnd_ :    (LEU14)  (ASN158)   [view usage] : c.1.9.0 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |automated matches |automated matches |Novosphingobium aromaticivorans [TaxId: 279238]
 d4infc_ :    (LEU14)  (ASN158)   [view usage] : c.1.9.0 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |automated matches |automated matches |Novosphingobium aromaticivorans [TaxId: 279238]
 d3s4tg_ :     (GLY3)  (ASN128)   [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |automated matches |Polaromonas sp. [TaxId: 296591]
 d4qs5c_ :    (LEU14)  (ASN158)   [view usage] : c.1.9.0 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |automated matches |automated matches |Novosphingobium aromaticivorans [TaxId: 279238]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1