Protein Concepts Dictionary

Tableau information

Concept source:  d3c9ra2  amino acid (a.a.) range (GLY148)(HIS268)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EHHHEHEHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY148)  (SER154) E1
	  (SER160)  (MET169) H2
	  (GLU175)  (LEU186) H3
	  (VAL195)  (LYS200) H4
	  (ASN203)  (ASP207) E5
	  (LEU212)  (GLY224) H6
	  (VAL225)  (LEU230) E7
	  (SER237)  (TYR247) H8
	  (PRO251)  (LEU256) H9
	  (TYR262)  (HIS268) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
H2       34.2°   H2                                                             
H3      113.3° -111.2°   H3                                                      
H4     -168.8° -141.2°  -56.2°   H4                                               
E5      -27.7°    6.6° -113.5° -147.8°   E5                                        
H6      145.7°  145.1°   36.2°  -26.9°  148.8°   H6                                 
E7      -59.2°  -65.4°  171.5°  131.6°  -62.2°  148.9°   E7                          
H8       78.2°   47.1° -117.6° -102.5°   52.2° -124.9°  -66.5°   H8                   
H9      106.9°  109.9°    9.2°  -63.2°  111.2°   40.4°  162.5°  123.9°   H9            
E10     161.1° -163.7°   71.1°   26.4°  169.2°  -34.9°  114.5° -117.0°  -74.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1vqvb2 :   (GLY148)  (HIS268)   [view usage] : d.139.1.1 |PurM C-terminal domain-like |PurM C-terminal domain-like |PurM C-terminal domain-like |Thiamine monophosphate kinase (ThiL) C-terminal domain |Aquifex aeolicus [TaxId: 63363]
 d3c9ta2 :   (GLY148)  (HIS268)   [view usage] : d.139.1.1 |PurM C-terminal domain-like |PurM C-terminal domain-like |PurM C-terminal domain-like |Thiamine monophosphate kinase (ThiL) C-terminal domain |Aquifex aeolicus [TaxId: 63363]
 d3c9ra2 :   (GLY148)  (HIS268)   [view usage] : d.139.1.1 |PurM C-terminal domain-like |PurM C-terminal domain-like |PurM C-terminal domain-like |Thiamine monophosphate kinase (ThiL) C-terminal domain |Aquifex aeolicus [TaxId: 63363]
 d3p4ea2 :   (ALA181)  (PRO309)   [view usage] : d.139.1.0 |PurM C-terminal domain-like |PurM C-terminal domain-like |automated matches |automated matches |Vibrio cholerae [TaxId: 666]
 d3mcqa2 :   (ASP148)  (ALA266)   [view usage] : d.139.1.0 |PurM C-terminal domain-like |PurM C-terminal domain-like |automated matches |automated matches |Methylobacillus flagellatus [TaxId: 265072]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.139