Protein Concepts Dictionary

Tableau information

Concept source:  d1f9da_  amino acid (a.a.) range (GLN222)(THR375)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EHHHEEEHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLN222)  (ALA228) E1
	  (PRO229)  (GLY250) H2
	  (SER254)  (PHE272) H3
	  (THR287)  (ALA292) H4
	  (TYR299)  (GLY305) E5
	  (THR309)  (GLY315) E6
	  (SER317)  (PHE321) E7
	  (PRO326)  (ASP335) H8
	  (SER342)  (GLN364) H9
	  (ALA369)  (THR375) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
H2       60.4°   H2                                                             
H3     -100.7° -153.7°   H3                                                      
H4      -44.2°  -80.3°   98.9°   H4                                               
E5      167.5°  107.2°   91.3°  137.5°   E5                                        
E6      -20.2°  -80.5°  -81.1°   43.7°  172.2°   E6                                 
E7      -28.1°  -50.4° -120.9°  -31.2°  143.8°  -42.7°   E7                          
H8       98.4°   54.5° -117.0° -133.8°   72.8° -111.9° -102.6°   H8                   
H9      -55.3° -111.6°   61.9°  -37.2°  135.4°   38.9°  -61.9° -150.0°   H9            
E10     151.2°  120.5°   66.6°  157.6°  -33.7°  141.0°  170.8°   68.3°  126.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4kkfa_ :   (GLN214)  (SER367)   [view usage] : a.102.1.0 |alpha/alpha toroid |Six-hairpin glycosidases |automated matches |automated matches |Clostridium cellulovorans [TaxId: 1493]
 d1f9oa_ :   (GLN222)  (THR375)   [view usage] : a.102.1.2 |alpha/alpha toroid |Six-hairpin glycosidases |Cellulases catalytic domain |Processive endocellulase CelF (Cel48F) |Clostridium cellulolyticum [TaxId: 1521]
 d1g9ja_ :   (GLN222)  (THR375)   [view usage] : a.102.1.2 |alpha/alpha toroid |Six-hairpin glycosidases |Cellulases catalytic domain |Processive endocellulase CelF (Cel48F) |Clostridium cellulolyticum [TaxId: 1521]
 d1f9da_ :   (GLN222)  (THR375)   [view usage] : a.102.1.2 |alpha/alpha toroid |Six-hairpin glycosidases |Cellulases catalytic domain |Processive endocellulase CelF (Cel48F) |Clostridium cellulolyticum [TaxId: 1521]
 d4kiha_ :   (GLN214)  (SER369)   [view usage] : a.102.1.0 |alpha/alpha toroid |Six-hairpin glycosidases |automated matches |automated matches |Clostridium cellulovorans [TaxId: 1493]
 d4kkka_ :   (GLN214)  (SER367)   [view usage] : a.102.1.0 |alpha/alpha toroid |Six-hairpin glycosidases |automated matches |automated matches |Clostridium cellulovorans [TaxId: 1493]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.102