Protein Concepts Dictionary

Tableau information

Concept source:  d1ye5b_  amino acid (a.a.) range (PRO5)(ASP115)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EHHEHHEHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (PRO5)   (SER11) E1
	   (SER11)   (SER19) H2
	   (LYS23)   (PHE33) H3
	   (PHE33)   (ILE39) E4
	   (ILE39)   (LYS53) H5
	   (ASN55)   (ILE66) H6
	   (ASN68)   (LEU72) E7
	   (LEU73)   (GLU91) H8
	   (ASP95)  (TYR107) H9
	  (SER110)  (ASP115) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
H2      -99.6°   H2                                                             
H3     -136.5° -115.7°   H3                                                      
E4      -38.2° -128.2°  -98.4°   E4                                               
H5       43.9°  -55.7° -156.7°  -77.4°   H5                                        
H6     -162.2°   91.4°  -45.6° -138.3°  144.2°   H6                                 
E7      -57.9° -156.4°   82.5°  -29.1° -101.6° -112.1°   E7                          
H8      -63.9°  119.2°  113.4°  -75.0°  -87.9°   98.6°  -60.0°   H8                   
H9      171.3°   78.1°   41.3°  138.1° -133.2°  -26.1°  123.0°  124.7°   H9            
E10     -43.2°   73.4°  167.8°  -80.4°   35.0°  129.7°  -91.1°  -54.5° -141.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1y82d_ :     (PRO5)  (ASP115)   [view usage] : c.120.1.1 |PIN domain-like |PIN domain-like |PIN domain |Hypothetical protein PF0355 |Pyrococcus furiosus [TaxId: 2261]
 d2fe1a1 :     (MET1)  (LEU117)   [view usage] : c.120.1.1 |PIN domain-like |PIN domain-like |PIN domain |Conserved hypothetical protein PAE0151 |Pyrobaculum aerophilum [TaxId: 13773]
 d1ye5a_ :     (PRO5)  (ASP115)   [view usage] : c.120.1.1 |PIN domain-like |PIN domain-like |PIN domain |Hypothetical protein PH0500 |Pyrococcus horikoshii [TaxId: 53953]
 d1y82b_ :     (PRO5)  (ASP115)   [view usage] : c.120.1.1 |PIN domain-like |PIN domain-like |PIN domain |Hypothetical protein PF0355 |Pyrococcus furiosus [TaxId: 2261]
 d1y82a1 :     (PRO5)  (ASP115)   [view usage] : c.120.1.1 |PIN domain-like |PIN domain-like |PIN domain |Hypothetical protein PF0355 |Pyrococcus furiosus [TaxId: 2261]
 d1ye5b_ :     (PRO5)  (ASP115)   [view usage] : c.120.1.1 |PIN domain-like |PIN domain-like |PIN domain |Hypothetical protein PH0500 |Pyrococcus horikoshii [TaxId: 53953]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 c.120