Tableau information
Concept source: d3tkpa_ amino acid (a.a.) range (TYR73)(LYS203)
nSSEs in this Concept: 10
String of secondary struct.elems. (SSEs) defining this concept: EHHEHEHEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(TYR73) (TYR79) E1
(VAL86) (LEU98) H2
(LEU98) (ASN105) H3
(GLU107) (VAL113) E4
(GLN116) (THR125) H5
(PRO138) (THR144) E6
(GLN146) (GLY152) H7
(ARG163) (ASP169) E8
(ARG175) (ASP181) E9
(ASP189) (LYS203) H10
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -160.7° H2
H3 -147.1° -48.9° H3
E4 -22.8° -161.7° 124.7° E4
H5 91.5° -75.0° -121.2° 114.1° H5
E6 -52.0° 142.9° 95.3° -31.0° 142.1° E6
H7 -109.3° 85.1° 70.5° -109.8° -91.3° -92.0° H7
E8 167.5° -26.7° 22.2° 145.0° -100.1° 117.2° 75.3° E8
E9 -17.5° 147.1° -163.9° -40.2° 74.2° -68.7° -106.7° 173.9° E9
H10 149.2° -48.6° 7.0° 127.7° -117.8° 97.3° 63.8° -22.3° 163.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2riia_ : (TYR38) (GLY170) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1zyea1 : (TYR33) (ALA163) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Peroxiredoxin-3 (AOP-1, SP-22) |Cow (Bos taurus) [TaxId: 9913]
d1zofb_ : (VAL36) (GLU164) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Helicobacter pylori [TaxId: 210]
d3a2wa_ : (PHE37) (LYS168) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Aeropyrum pernix [TaxId: 272557]
d3zvjp_ : (TYR34) (LYS164) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Blood fluke (Schistosoma mansoni) [TaxId: 6183]
d2v2gb_ : (TRP31) (GLN168) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Arenicola marina [TaxId: 6344]
d2v2ga_ : (TRP31) (GLN168) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Arenicola marina [TaxId: 6344]
d3hy2b_ : (TYR38) (GLU171) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3tjga_ : (TYR110) (LYS240) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4k7oc_ : (GLY34) (LEU161) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1yepc_ : (TRP32) (PRO161) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Alkyl hydroperoxide reductase AhpC |Salmonella typhimurium [TaxId: 90371]
d1yf0c_ : (TRP32) (PRO161) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Alkyl hydroperoxide reductase AhpC |Salmonella typhimurium [TaxId: 90371]
d2p31a_ : (VAL47) (ALA174) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2h01a1 : (TYR30) (LYS159) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Thioredoxin peroxidase 2 (thioredoxin peroxidase B, 2-cys peroxiredoxin) |Plasmodium yoelii [TaxId: 5861]
d3hy2a_ : (TYR38) (GLY170) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2v41c_ : (TRP31) (LYS169) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Arenicola marina [TaxId: 6344]
d3zvjr_ : (TYR34) (GLY166) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Blood fluke (Schistosoma mansoni) [TaxId: 6183]
d1zofa1 : (VAL36) (GLU163) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Thioredoxin reductase TsaA |Helicobacter pylori [TaxId: 210]
d3zvjb_ : (TYR34) (LYS164) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Blood fluke (Schistosoma mansoni) [TaxId: 6183]
d1yf0a1 : (TRP32) (ALA159) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Alkyl hydroperoxide reductase AhpC |Salmonella typhimurium [TaxId: 90371]
d3sbcd_ : (TYR33) (LYS163) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2c0db_ : (TYR53) (THR182) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Plasmodium falciparum [TaxId: 36329]
d1yf1c_ : (TRP32) (PRO161) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Alkyl hydroperoxide reductase AhpC |Salmonella typhimurium [TaxId: 90371]
d2v2gd_ : (TRP31) (GLN168) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Arenicola marina [TaxId: 6344]
d3a5wb_ : (PHE37) (LYS168) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Aeropyrum pernix [TaxId: 272557]
d3zvjk_ : (LYS33) (GLY166) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Blood fluke (Schistosoma mansoni) [TaxId: 6183]
d2riib_ : (TYR38) (GLY170) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.47