Tableau information
Concept source: d2az1a1 amino acid (a.a.) range (THR8)(MET92)
nSSEs in this Concept: 10
String of secondary struct.elems. (SSEs) defining this concept: EHHEEHHHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR8) (VAL12) E1
(PRO14) (GLY20) H2
(LEU21) (GLY33) H3
(GLY33) (VAL37) E4
(VAL37) (PHE41) E5
(GLU46) (HIS52) H6
(ALA54) (LYS59) H7
(PHE62) (THR70) H8
(GLY72) (GLY81) E9
(ARG86) (MET92) H10
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -52.9° H2
H3 154.0° 104.8° H3
E4 -87.5° -108.5° -114.9° E4
E5 -25.7° -76.7° 175.5° -68.1° E5
H6 -129.7° 120.1° 44.5° 130.2° -131.1° H6
H7 -57.4° -104.6° 129.3° -93.2° -46.4° 84.9° H7
H8 75.5° 35.3° -93.0° -84.5° -90.6° 130.8° -132.9° H8
E9 152.2° 102.1° -3.1° 115.0° -176.9° 47.1° 131.9° -89.9° E9
H10 30.1° 58.9° 130.7° -114.3° -46.3° -100.0° -46.5° 92.0° 130.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1be4a_ : (GLU5) (GLY92) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Cow (Bos taurus) [TaxId: 9913]
d1paex_ : (LYS8) (GLY96) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
d2zuab_ : (THR7) (GLY92) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Haloarcula quadrata [TaxId: 182779]
d1xiqa_ : (MET1) (LYS82) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
d3ngtb_ : (GLU4) (GLY91) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |automated matches |Leishmania major [TaxId: 5664]
d4di6e_ : (THR8) (GLY98) [view usage] : d.58.6.0 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |automated matches |automated matches |Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]
d3prvb_ : (THR6) (GLY91) [view usage] : d.58.6.0 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
d2az1a1 : (THR8) (MET92) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Halobacterium salinarum [TaxId: 2242]
d1pkub_ : (GLU5) (GLY92) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |automated matches |Rice (Oryza sativa) [TaxId: 4530]
d4anea_ : (THR2) (ALA89) [view usage] : d.58.6.0 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d1xqia1 : (VAL15) (GLY136) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Pyrobaculum aerophilum [TaxId: 13773]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.58