Protein Concepts Dictionary

Tableau information

Concept source:  d4nnnc_  amino acid (a.a.) range (HIS68)(GLN202)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EHHEEEEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (HIS68)   (PHE73) E1
	   (LEU76)   (THR97) H2
	  (THR103)  (GLN120) H3
	  (GLY123)  (VAL129) E4
	  (SER130)  (GLY135) E5
	  (LYS144)  (PRO150) E6
	  (GLY152)  (SER156) E7
	  (SER158)  (GLY163) E8
	  (LYS167)  (TYR177) H9
	  (THR185)  (GLN202) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
H2      158.3°   H2                                                             
H3      -32.6°  130.1°   H3                                                      
E4      108.8°  -88.2° -141.2°   E4                                               
E5      166.5°  -33.3°  160.6°   57.8°   E5                                        
E6      -34.5°  129.3°    3.2° -142.4°  158.5°   E6                                 
E7      124.8°  -68.9°  156.4°   21.4°  -42.5°  158.9°   E7                          
E8       38.8°  142.7°   35.3° -118.5° -144.0°   33.3° -139.8°   E8                   
H9     -135.7°  -49.5° -152.8°   46.6°   36.4° -155.6°   25.4°  164.9°   H9            
H10      10.5°  158.0°   28.0° -113.5° -167.2°  -28.9°  131.7°  -28.3°  145.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1ofhg_ :    (VAL42)  (ASP158)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |HslV (ClpQ) protease |Haemophilus influenzae [TaxId: 727]
 d1irue_ :    (HIS73)  (MET206)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome alpha subunit (non-catalytic) |Cow (Bos taurus) [TaxId: 9913]
 d3wxrg_ :    (HIS72)  (GLY185)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
 d4g4sa_ :    (THR78)  (ALA213)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
 d4nnnc_ :    (HIS68)  (GLN202)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1vsyd_ :  (HIS4070) (VAL4202)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.153