Protein Concepts Dictionary

Tableau information

Concept source:  d2wj2b_  amino acid (a.a.) range (ARG326)(PRO473)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EHEHHHHHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ARG326)  (THR332) E1
	  (SER339)  (GLY357) H2
	  (GLY357)  (PRO362) E3
	  (ASN367)  (LYS393) H4
	  (ASP403)  (LEU410) H5
	  (PRO411)  (LEU422) H6
	  (LEU422)  (PRO427) H7
	  (PRO427)  (ARG437) H8
	  (ALA441)  (ASN466) H9
	  (ASP468)  (PRO473) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
H2     -161.0°   H2                                                             
E3      -43.5° -138.5°   E3                                                      
H4      -70.5°  127.0°  -79.1°   H4                                               
H5       89.3°  -97.7°   46.1°  -88.8°   H5                                        
H6       82.4°  -78.6°  -94.2°  147.1° -109.7°   H6                                 
H7      125.8°  -42.2° -156.0°  120.5° -138.8°  -61.8°   H7                          
H8     -110.5°   88.1°   87.0°  -51.5°  -58.6° -161.2° -115.7°   H8                   
H9      120.7°  -41.7°  135.8° -141.9°  125.2°   43.5°  -21.8° -128.3°   H9            
E10     -20.5°  149.3°  -64.0°  -69.0°  109.6°   79.1°  107.9° -117.9°  108.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2wj2b_ :   (ARG326)  (PRO473)   [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1mt5a_ :   (ARG326)  (PRO473)   [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Fatty acid amide hydrolase (oleamide hydrolase) |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2wapa_ :   (ARG326)  (PRO473)   [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2wapb_ :   (ARG326)  (PRO473)   [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2vyaa_ :   (ARG326)  (ALA478)   [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3qkvb_ :   (ARG326)  (PRO473)   [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2vyab_ :   (ARG326)  (PRO473)   [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 c.117