Protein Concepts Dictionary

Tableau information

Concept source:  d3ihqa_  amino acid (a.a.) range (MET1)(ARG111)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EHEHHHHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (MET1)    (TYR5) E1
	   (SER10)   (GLU24) H2
	   (PHE27)   (ASN31) E3
	   (SER38)   (THR49) H4
	   (ASP51)   (ILE57) H5
	   (SER61)   (LYS66) H6
	   (PRO75)   (GLU85) H7
	   (PRO93)   (GLU98) E8
	   (LYS99)  (VAL103) E9
	  (ASN106)  (ARG111) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
H2     -166.3°   H2                                                             
E3      -21.7° -159.9°   E3                                                      
H4     -102.6°   78.8° -121.3°   H4                                               
H5      -64.8° -102.3°  -68.1°  117.6°   H5                                        
H6       60.5°  133.1°   51.8°  -97.2° -119.9°   H6                                 
H7       83.2°  -84.0°   84.8°  116.4°   18.4°  135.4°   H7                          
E8      149.1°  -44.4°  133.4°   82.6° -139.6°   88.7° -122.2°   E8                   
E9      -22.9°  144.0°  -41.0°  -95.5°   48.9°  -82.7°   66.6° -170.9°   E9            
H10     158.0°  -33.9°  137.8°   89.6° -125.4°  100.2° -108.0°   14.3° -173.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.5°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3ihqa_ :     (MET1)  (ARG111)   [view usage] : c.47.1.12 |Thioredoxin fold |Thioredoxin-like |ArsC-like |automated matches |Bacillus subtilis [TaxId: 1423]
 d1z3ea1 :     (MET1)  (LEU114)   [view usage] : c.47.1.12 |Thioredoxin fold |Thioredoxin-like |ArsC-like |Regulatory protein Spx |Bacillus subtilis [TaxId: 1423]
 d3l78a_ :     (MET1)  (LEU114)   [view usage] : c.47.1.12 |Thioredoxin fold |Thioredoxin-like |ArsC-like |automated matches |Streptococcus mutans [TaxId: 210007]
 d3f0ia_ :     (SER2)  (ILE115)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Vibrio cholerae [TaxId: 666]
 d1i9da_ :     (ASN3)  (ASP114)   [view usage] : c.47.1.12 |Thioredoxin fold |Thioredoxin-like |ArsC-like |Arsenate reductase ArsC |Escherichia coli [TaxId: 562]
 d3f0ib_ :     (SER2)  (ILE115)   [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Vibrio cholerae [TaxId: 666]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.47