Protein Concepts Dictionary

Tableau information

Concept source:  d3p3vb_  amino acid (a.a.) range (ILE7)(ASP112)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EHEHHEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ILE7)   (ASP12) E1
	   (GLN19)   (ASN28) H2
	   (ASN30)   (ASN36) E3
	   (ASN36)   (ASP42) H4
	   (ASP42)   (ILE53) H5
	   (ILE57)   (SER63) E6
	   (SER63)   (ASP69) H7
	   (SER79)   (LYS85) E8
	   (LEU87)   (GLY97) H9
	  (THR101)  (ASP112) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
H2      168.3°   H2                                                             
E3      -37.2°  144.1°   E3                                                      
H4       91.5°  -97.9° -104.5°   H4                                               
H5      123.7°  -48.2°  149.9°  -97.7°   H5                                        
E6      -56.9°  125.1°  -19.8° -109.5°  152.7°   E6                                 
H7     -168.7°   11.0° -134.5°   99.1°  -59.1°  115.0°   H7                          
E8      -17.8°  158.2°  -20.9°  102.8°  133.6°  -40.3° -151.8°   E8                   
H9      145.1°  -41.0°  108.3°  -95.4°  -89.2°   88.7°  -30.1°  128.9°   H9            
E10      -6.7°  167.3°  -43.4°   86.8°  119.7°  -63.2° -174.1°  -24.4° -150.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3lfja_ :     (PHE6)  (ILE105)   [view usage] : c.38.1.0 |PTS IIb component |PTS IIb component |automated matches |automated matches |Thermoanaerobacter tengcongensis [TaxId: 273068]
 d3lfjb_ :     (PHE6)  (ILE105)   [view usage] : c.38.1.0 |PTS IIb component |PTS IIb component |automated matches |automated matches |Thermoanaerobacter tengcongensis [TaxId: 273068]
 d1blea_ :     (MET2)  (ASN112)   [view usage] : c.38.1.1 |PTS IIb component |PTS IIb component |PTS IIb component |Fructose permease, subunit IIb |Bacillus subtilis [TaxId: 1423]
 d3p3vb_ :     (ILE7)  (ASP112)   [view usage] : c.38.1.0 |PTS IIb component |PTS IIb component |automated matches |automated matches |Streptococcus pyogenes [TaxId: 301447]
 d3p3va_ :     (PRO4)  (ASP112)   [view usage] : c.38.1.0 |PTS IIb component |PTS IIb component |automated matches |automated matches |Streptococcus pyogenes [TaxId: 301447]
 d3eyea_ :     (LEU8)  (GLU114)   [view usage] : c.38.1.0 |PTS IIb component |PTS IIb component |automated matches |automated matches |Escherichia coli O157:H7 [TaxId: 83334]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.38