Tableau information
Concept source: d1r9ja1 amino acid (a.a.) range (ARG401)(LEU516)
nSSEs in this Concept: 10
String of secondary struct.elems. (SSEs) defining this concept: EHEHHEHEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ARG401) (GLY406) E1
(GLU409) (ALA421) H2
(ILE426) (THR431) E3
(PHE432) (LEU440) H4
(LEU440) (HIS450) H5
(VAL453) (HIS459) E6
(LEU476) (ALA482) H7
(ASN485) (PRO491) E8
(GLN494) (SER507) H9
(THR510) (LEU516) E10
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 154.7° H2
E3 -28.4° -174.9° E3
H4 83.4° -71.7° 111.8° H4
H5 145.5° 20.2° -155.8° -73.0° H5
E6 -52.9° 151.2° -24.7° -136.1° -141.6° E6
H7 126.1° -29.4° 151.6° 46.8° -26.3° -160.4° H7
E8 -90.9° 114.3° -62.6° -172.8° 114.1° -38.8° -140.2° E8
H9 100.5° -55.8° 128.4° 19.4° 62.3° 153.0° 37.0° -162.3° H9
E10 -67.2° 138.0° -39.2° -149.6° -136.6° -17.6° -162.8° -23.9° -159.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4c7va2 : (ARG403) (LEU518) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Lactobacillus salivarius [TaxId: 362948]
d1itza2 : (ARG415) (LEU531) [view usage] : c.36.1.6 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |TK-like Pyr module |Transketolase (TK), Pyr module |Maize (Zea mays) [TaxId: 4577]
d1ay0a2 : (ARG410) (SER527) [view usage] : c.36.1.6 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |TK-like Pyr module |Transketolase (TK), Pyr module |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1w85g_ : (ASN136) (GLU262) [view usage] : c.36.1.11 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase PP module |Pyruvate dehydrogenase E1-alpha, PdhA |Bacillus stearothermophilus [TaxId: 1422]
d1qs0b1 : (ASN25) (PRO175) [view usage] : c.36.1.7 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase Pyr module |2-oxoisovalerate dehydrogenase (E1B), Pyr module |Pseudomonas putida [TaxId: 303]
d3hyla2 : (LYS404) (LEU519) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
d1qgda1 : (ASN403) (LEU518) [view usage] : c.36.1.6 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |TK-like Pyr module |Transketolase (TK), Pyr module |Escherichia coli [TaxId: 562]
d1r9ja1 : (ARG401) (LEU516) [view usage] : c.36.1.6 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |TK-like Pyr module |Transketolase (TK), Pyr module |Leishmania mexicana mexicana [TaxId: 44270]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.36