Tableau information
Concept source: d3zzxa_ amino acid (a.a.) range (MET1)(LYS105)
nSSEs in this Concept: 10
String of secondary struct.elems. (SSEs) defining this concept: EHEHHEHEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(MET1) (ASP7) E1
(ASP7) (ALA18) H2
(LEU22) (TYR28) E3
(CYS32) (ILE38) H4
(ALA39) (SER48) H5
(VAL53) (ASP58) E6
(GLU63) (GLN70) H7
(PRO75) (LYS81) E8
(ASP87) (GLY91) E9
(TYR94) (LYS105) H10
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -136.8° H2
E3 -70.2° 151.7° E3
H4 140.1° 31.6° -137.5° H4
H5 109.2° 38.0° -159.9° 33.6° H5
E6 -52.2° -167.3° -18.0° -151.6° -154.7° E6
H7 90.7° -65.4° -114.6° 97.0° 85.4° -109.5° H7
E8 90.6° -49.0° 159.2° -55.5° -22.6° 142.3° 72.2° E8
E9 -101.1° 121.6° -30.9° 109.8° 142.2° -48.9° -116.9° 164.8° E9
H10 85.2° -55.2° 152.8° -59.3° -25.7° 136.4° 76.0° 6.5° -165.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1r26a_ : (SER1) (LYS104) [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d4knda_ : (ASP5) (ILE108) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Anaeromyxobacter dehalogenans [TaxId: 290397]
d3gnjd_ : (SER2) (GLU107) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Desulfitobacterium hafniense [TaxId: 272564]
d2fchc_ : (LYS3) (LEU107) [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Escherichia coli [TaxId: 562]
d3gnjb_ : (SER2) (LEU106) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Desulfitobacterium hafniense [TaxId: 272564]
d4ll1b_ : (MET1) (LEU104) [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Human (Homo sapiens) [TaxId: 9606]
d3wgea_ : (GLY190) (LEU294) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2fa4a_ : (MET1) (VAL104) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2b5ea4 : (ALA33) (GLN140) [view usage] : c.47.1.2 |Thioredoxin fold |Thioredoxin-like |PDI-like |Protein disulfide isomerase, PDI |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2xc2a_ : (MET1) (PHE105) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Blood fluke (Schistosoma mansoni) [TaxId: 6183]
d3zzxa_ : (MET1) (LYS105) [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |automated matches |Pacific white shrimp (Litopenaeus vannamei) [TaxId: 6689]
d2fcha_ : (LYS3) (LEU107) [view usage] : c.47.1.1 |Thioredoxin fold |Thioredoxin-like |Thioltransferase |Thioredoxin |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.47