Tableau information
Concept source: d3qyta2 amino acid (a.a.) range (LYS340)(PHE480)
nSSEs in this Concept: 10
String of secondary struct.elems. (SSEs) defining this concept: EHEHHEEEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS340) (CYS345) E1
(HIS349) (ASN361) H2
(LYS365) (GLU372) E3
(THR374) (ASN383) H4
(ASP392) (GLY403) H5
(GLY403) (TYR412) E6
(GLY425) (ALA430) E7
(LYS447) (THR452) E8
(ARG456) (ASN472) H9
(ARG475) (PHE480) H10
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 162.5° H2
E3 -21.9° -173.8° E3
H4 153.6° -43.9° 131.9° H4
H5 120.6° -76.7° 98.8° -33.1° H5
E6 -79.1° 83.8° -101.0° 126.9° -159.9° E6
E7 -12.4° 158.2° -23.1° -151.2° -119.0° 81.1° E7
E8 -162.6° -21.4° 152.5° 34.1° -62.8° 99.7° 150.4° E8
H9 50.3° -140.4° 42.1° -109.9° 85.7° -106.9° -60.0° -143.8° H9
H10 -49.8° 112.8° -71.7° 156.3° 170.4° 29.4° -52.1° -126.5° 86.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2haua1 : (VAL342) (SER481) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Transferrin |Human (Homo sapiens) [TaxId: 9606]
d1ce2a1 : (VAL6) (SER137) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Domestic water buffalo (Bubalus arnee bubalis) [TaxId: 89462]
d3qyta2 : (LYS340) (PHE480) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1n76a2 : (ARG344) (SER490) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Human (Homo sapiens) [TaxId: 9606]
d4h0wa2 : (LYS340) (PHE480) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1b1xa1 : (ALA1) (PHE152) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Horse (Equus caballus) [TaxId: 9796]
d1lfha2 : (ARG344) (SER490) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Human (Homo sapiens) [TaxId: 9606]
d1lfga2 : (ALA343) (SER490) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Human (Homo sapiens) [TaxId: 9606]
d1suve_ : (LYS340) (PHE479) [view usage] : i.21.1.1 |Transferrin receptor-transferrin complex |Transferrin receptor-transferrin complex |Transferrin receptor-transferrin complex |Transferrin receptor-transferrin complex |Human (Homo sapiens) [TaxId: 9606]
d1jnfa2 : (LYS340) (PHE479) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Transferrin |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d1b0la2 : (ALA343) (SER490) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Lactoferrin |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.94, i.21