Tableau information
Concept source: d3pqea1 amino acid (a.a.) range (ASN6)(PHE135)
nSSEs in this Concept: 10
String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASN6) (GLY12) E1
(GLY14) (GLY28) H2
(ASP31) (ASP37) E3
(LYS42) (HIS52) H4
(PRO60) (TYR65) E5
(THR67) (ASP73) H6
(ASP75) (PRO87) E7
(THR90) (SER112) H8
(GLY116) (THR122) E9
(VAL125) (PHE135) H10
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -160.4° H2
E3 -17.7° -169.3° E3
H4 142.7° -18.4° 158.0° H4
E5 -32.6° 161.4° -15.0° -167.3° E5
H6 -151.7° 36.0° -154.4° 44.2° -147.7° H6
E7 -18.6° 147.0° -35.3° 128.7° -49.7° -135.8° E7
H8 138.3° -51.1° 123.4° -67.2° 110.5° -67.8° 156.3° H8
E9 -33.0° 129.9° -50.7° 111.4° -65.6° 128.2° -17.6° 157.4° E9
H10 113.9° -82.4° 96.3° -100.5° 81.4° -81.0° 130.6° -36.8° 146.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.5° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2g5ca2 : (GLN31) (GLY140) [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |Prephenate dehydrogenase TyrA |Aquifex aeolicus [TaxId: 63363]
d1mx3a1 : (GLU175) (ASP271) [view usage] : c.2.1.4 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Formate/glycerate dehydrogenases, NAD-domain |Transcription corepressor CtbP |Human (Homo sapiens), Ctbp1 [TaxId: 9606]
d1t26a1 : (ALA21) (HIS152) [view usage] : c.2.1.5 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |LDH N-terminal domain-like |Lactate dehydrogenase |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d3vkue1 : (HIS9) (GLY140) [view usage] : c.2.1.5 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |LDH N-terminal domain-like |Lactate dehydrogenase |Lactobacillus casei [TaxId: 1582]
d2zwib_ : (ASN38) (ARG161) [view usage] : c.87.1.0 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |automated matches |automated matches |Photobacterium phosphoreum [TaxId: 659]
d2iypb1 : (PHE6) (GLY119) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Lactococcus lactis [TaxId: 1358]
d3vkub1 : (GLN10) (LEU138) [view usage] : c.2.1.5 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |LDH N-terminal domain-like |Lactate dehydrogenase |Lactobacillus casei [TaxId: 1582]
d3wsvb1 : (ARG6) (GLU135) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Enterococcus mundtii [TaxId: 53346]
d4ln1b1 : (ILE5) (GLU135) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus cereus [TaxId: 226900]
d3pqda1 : (ASN6) (LYS134) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d4m1qa1 : (THR5) (PHE134) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus selenitireducens [TaxId: 439292]
d2zqzb1 : (GLN21) (LEU150) [view usage] : c.2.1.5 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |LDH N-terminal domain-like |Lactate dehydrogenase |Lactobacillus casei [TaxId: 1582]
d2f9fa1 : (TRP16) (GLY132) [view usage] : c.87.1.8 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Glycosyl transferases group 1 |First mannosyl transferase WbaZ |Archaeoglobus fulgidus [TaxId: 2234]
d2gr9a1 : (GLY0) (LEU108) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4a73b1 : (MET22) (LEU152) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d2e37a1 : (MSE1) (LEU129) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d2zyga1 : (GLN5) (ARG111) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
d2zqyb1 : (GLN21) (GLY152) [view usage] : c.2.1.5 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |LDH N-terminal domain-like |Lactate dehydrogenase |Lactobacillus casei [TaxId: 1582]
d3pqea1 : (ASN6) (PHE135) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d1hyea1 : (MET1) (ASP135) [view usage] : c.2.1.5 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |LDH N-terminal domain-like |MJ0490, lactate/malate dehydrogenase |Methanococcus jannaschii [TaxId: 2190]
d3h3ja1 : (ASN7) (LYS135) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
d4kqxa1 : (LEU28) (GLY125) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Slackia exigua [TaxId: 649764]
d1t24a1 : (ALA21) (HIS152) [view usage] : c.2.1.5 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |LDH N-terminal domain-like |Lactate dehydrogenase |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d1txga2 : (MET1) (TRP122) [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |Glycerol-3- phosphate dehydrogenase |Archaeoglobus fulgidus [TaxId: 2234]
d1gdha1 : (LYS148) (ASP245) [view usage] : c.2.1.4 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Formate/glycerate dehydrogenases, NAD-domain |D-glycerate dehydrogenase |Hyphomicrobium methylovorum [TaxId: 84]
d2izze1 : (MET1) (LEU108) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1civa1 : (ILE43) (ALA182) [view usage] : c.2.1.5 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |LDH N-terminal domain-like |Malate dehydrogenase |Flaveria bidentis, chloroplast [TaxId: 4224]
d2iypc1 : (ASN5) (GLY119) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Lactococcus lactis [TaxId: 1358]
d2fn7a1 : (ARG21) (GLY154) [view usage] : c.2.1.5 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |LDH N-terminal domain-like |Lactate dehydrogenase |Cryptosporidium parvum [TaxId: 5807]
d2g5cb2 : (GLN31) (GLY140) [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |Prephenate dehydrogenase TyrA |Aquifex aeolicus [TaxId: 63363]
d1t2da1 : (ALA4) (HIS138) [view usage] : c.2.1.5 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |LDH N-terminal domain-like |Lactate dehydrogenase |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d1seva1 : (PHE45) (GLY179) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Citrullus lanatus [TaxId: 3654]
d2atca2 : (HIS156) (ALA269) [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Aspartate carbamoyltransferase catalytic subunit |Escherichia coli [TaxId: 562]
d2gera1 : (ALA0) (ALA110) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2jkva1 : (ILE6) (ARG112) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1hkua1 : (GLU164) (ASP260) [view usage] : c.2.1.4 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Formate/glycerate dehydrogenases, NAD-domain |Transcription corepressor CtbP |Norway rat (Rattus norvegicus), Ctbp3 [TaxId: 10116]
d1gz5a_ : (ASN253) (GLU393) [view usage] : c.87.1.6 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Trehalose-6-phosphate synthase, OtsA |Trehalose-6-phosphate synthase, OtsA |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.2, c.87, c.78