Protein Concepts Dictionary

Tableau information

Concept source:  d3olwa_  amino acid (a.a.) range (LYS7)(GLY128)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LYS7)   (ASP12) E1
	   (SER15)   (GLY29) H2
	   (ASN32)   (GLU37) E3
	   (ASP38)   (ALA48) H4
	   (GLY52)   (SER56) E5
	   (GLY65)   (ASP75) H6
	   (PRO82)   (THR87) E7
	   (LYS92)  (GLY102) H8
	  (SER104)  (VAL108) E9
	  (THR112)  (GLY128) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
H2      152.6°   H2                                                             
E3      -24.1°  169.2°   E3                                                      
H4      170.3°  -36.6°  148.2°   H4                                               
E5       -7.3°  145.3°  -30.9°  176.4°   E5                                        
H6      150.0°  -51.8°  127.2°  -27.8° -154.1°   H6                                 
E7      -20.3°  136.1°  -43.6°  161.8°  -16.0° -170.1°   E7                          
H8      149.7°  -57.0°  125.7°  -23.1°  156.6°   16.3°  164.4°   H8                   
E9      -36.9°  121.1°  -60.0°  146.2°  -32.2°  172.8°  -16.7°  162.8°   E9            
H10     133.6°  -64.3°  112.5°  -44.9°  137.1°  -17.1°  153.1°  -29.4°  167.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3h1fa_ :     (MET1)  (LEU120)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Helicobacter pylori [TaxId: 85962]
 d3rvna_ :     (LEU6)  (GLY128)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3lted_ :    (ARG69)  (ASN185)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Bermanella marisrubri [TaxId: 207949]
 d3lteq_ :    (ARG69)  (ASN185)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Bermanella marisrubri [TaxId: 207949]
 d3olxa_ :     (LYS7)  (GLY128)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |CheY protein |Escherichia coli [TaxId: 562]
 d1u8tb_ :     (LEU6)  (GLY128)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |CheY protein |Escherichia coli [TaxId: 562]
 d3w9sb_ :     (LYS2)  (LEU116)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 484021]
 d3ffta_ :     (LYS7)  (GLY128)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3b2na_ :     (SER5)  (VAL120)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 1280]
 d2nt4a_ :     (LYS3)  (ILE120)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Myxococcus xanthus [TaxId: 34]
 d1e6ka_ :     (LYS7)  (LEU127)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |CheY protein |Escherichia coli [TaxId: 562]
 d1chna_ :     (LYS7)  (GLY128)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |CheY protein |Escherichia coli [TaxId: 562]
 d3cu5b_ :     (LEU3)  (GLN128)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Clostridium phytofermentans [TaxId: 357809]
 d1miha_ :     (LYS7)  (GLY128)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |CheY protein |Escherichia coli [TaxId: 562]
 d1nxpa_ :     (LYS2)  (SER119)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |DNA-binding response regulator MicA, N-terminal domain |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
 d3ffwa_ :     (LYS7)  (GLY128)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3rvla_ :     (LEU6)  (GLY128)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3w9sa_ :     (LYS2)  (ARG117)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 484021]
 d3rvrb_ :     (LEU6)  (GLY128)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1ab5a_ :     (LYS7)  (LEU127)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |CheY protein |Escherichia coli [TaxId: 562]
 d1vlzb_ :     (LEU6)  (GLY128)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |CheY protein |Escherichia coli [TaxId: 562]
 d1ys6b2 :     (PRO8)  (ARG125)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |Transcriptional regulatory protein PrrA, N-terminal domain |Mycobacterium tuberculosis [TaxId: 1773]
 d3rvra_ :     (LEU6)  (GLY128)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1sd5a_ :    (ARG15)  (GLY140)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |Probable two-component system transcriptional regulator Rv1626 |Mycobacterium tuberculosis [TaxId: 1773]
 d3rvpa_ :     (LEU6)  (GLY128)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1u8ta_ :     (LEU6)  (LYS126)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |CheY protein |Escherichia coli [TaxId: 562]
 d3hv2b_ :    (PRO13)  (GLU135)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 220664]
 d3gwga_ :     (LYS2)  (LEU120)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Helicobacter pylori [TaxId: 85962]
 d3lteb_ :    (LYS68)  (ASN185)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Bermanella marisrubri [TaxId: 207949]
 d3olwa_ :     (LYS7)  (GLY128)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |CheY protein |Escherichia coli [TaxId: 562]
 d3rvlb_ :     (LYS7)  (GLY128)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3rvka_ :     (LYS7)  (LEU127)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3nnna_ :     (ASN2)  (ILE118)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
 d3fgza_ :     (LYS7)  (GLY128)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3h1ga_ :     (LYS2)  (LEU120)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |CheY protein |Helicobacter pylori [TaxId: 85962]
 d3f7na_ :     (LYS7)  (GLY128)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d2pl1a_ :     (MSE1)  (GLN121)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |PhoP receiver domain |Escherichia coli [TaxId: 562]
 d3rvja_ :     (LEU6)  (GLY128)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d4hnsa_ :    (LYS10)  (ILE126)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |automated matches |Vibrio cholerae [TaxId: 666]
 d3lteu_ :    (LYS68)  (VAL184)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Bermanella marisrubri [TaxId: 207949]
 d4l85c_ :     (ASN3)  (ARG117)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
 d3myya_ :     (LYS7)  (GLY128)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1vlza_ :     (LYS7)  (LEU127)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |CheY protein |Escherichia coli [TaxId: 562]
 d1zh2b_ :     (THR2)  (SER120)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
 d3rvqa_ :     (LYS7)  (GLY128)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3ffxa_ :     (LYS7)  (GLY128)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3olya_ :     (LYS7)  (GLY128)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |CheY protein |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.23