Protein Concepts Dictionary

Tableau information

Concept source:  d2ohha2  amino acid (a.a.) range (GLU257)(ARG403)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLU257)  (TYR263) E1
	  (GLY268)  (SER283) H2
	  (ASP287)  (CYS292) E3
	  (ARG298)  (SER308) H4
	  (GLY309)  (ALA315) E5
	  (TYR323)  (LEU336) H6
	  (LYS345)  (SER351) E7
	  (GLY357)  (GLY370) H8
	  (ALA374)  (TYR380) E9
	  (THR384)  (ARG403) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
H2     -173.7°   H2                                                             
E3      -10.7°  175.0°   E3                                                      
H4     -150.6°   28.1° -155.0°   H4                                               
E5      -12.3°  161.8°  -22.9° -141.5°   E5                                        
H6      138.7°   47.6°  128.5°  -55.3° -149.4°   H6                                 
E7      -27.9°  145.7°  -38.3°  134.6°  -17.4° -166.6°   E7                          
H8      132.9°  -53.2°  122.2°  -67.1°  145.1°   14.6°  158.2°   H8                   
E9      -34.0°  139.8°  -43.8°  133.5°  -24.7° -171.2°   -7.9°  158.1°   E9            
H10     141.4°  -44.8°  130.7°  -57.9°  153.3°    9.1° -167.5°   -9.3° -166.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4d02a2 :   (ARG253)  (ALA397)   [view usage] : c.23.5.0 |Flavodoxin-like |Flavoproteins |automated matches |automated matches |Escherichia coli [TaxId: 83333]
 d2q9ua2 :   (LYS258)  (ASN410)   [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |Nitric oxide reductase C-terminal domain |Giardia intestinalis [TaxId: 5741]
 d2fz5a1 :     (MET1)  (ALA137)   [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |Flavodoxin |Megasphaera elsdenii [TaxId: 907]
 d1ykga1 :    (ILE63)  (ARG207)   [view usage] : c.23.5.2 |Flavodoxin-like |Flavoproteins |Cytochrome p450 reductase N-terminal domain-like |Sulfite reductase alpha-component CysJ N-terminal domain |Escherichia coli [TaxId: 562]
 d2ohha2 :   (GLU257)  (ARG403)   [view usage] : c.23.5.0 |Flavodoxin-like |Flavoproteins |automated matches |automated matches |Methanothermobacter thermautotrophicus [TaxId: 145262]
 d2q62b_ :    (ARG36)  (THR211)   [view usage] : c.23.5.4 |Flavodoxin-like |Flavoproteins |NADPH-dependent FMN reductase |automated matches |Rhizobium meliloti (Sinorhizobium meliloti) [TaxId: 382]
 d1ycfa1 :   (ALA253)  (ALA398)   [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |Nitric oxide reductase C-terminal domain |Moorella thermoacetica [TaxId: 1525]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.23