Protein Concepts Dictionary

Tableau information

Concept source:  d1ehca_  amino acid (a.a.) range (LEU6)(GLY128)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LEU6)   (ASP12) E1
	   (SER15)   (GLY29) H2
	   (ASN32)   (GLU37) E3
	   (ASP38)   (GLY49) H4
	   (GLY52)   (ASP57) E5
	   (ASP64)   (ASP75) H6
	   (PRO82)   (ALA88) E7
	   (LYS91)  (GLY102) H8
	  (GLY105)  (LYS109) E9
	  (ALA113)  (GLY128) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
H2      157.1°   H2                                                             
E3      -20.2°  165.1°   E3                                                      
H4      163.3°  -39.5°  146.3°   H4                                               
E5      -16.9°  140.2°  -34.7°  178.2°   E5                                        
H6      147.1°  -53.2°  127.0°  -22.9° -158.8°   H6                                 
E7      -28.0°  130.9°  -47.9°  162.6°  -15.6° -174.4°   E7                          
H8      143.0°  -59.6°  124.6°  -21.7°  159.3°   13.7°  166.9°   H8                   
E9      -49.1°  118.7°  -67.8°  134.0°  -44.1°  154.6°  -29.9°  142.6°   E9            
H10     123.4°  -69.9°  104.2°  -51.4°  130.4°  -29.2°  145.6°  -39.1° -171.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.8°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2vuib_ :     (ALA7)  (LEU140)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Rhodobacter capsulatus [TaxId: 1061]
 d1mvoa_ :     (LYS3)  (ARG120)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |PhoP receiver domain |Bacillus subtilis [TaxId: 1423]
 d1yioa2 :     (PRO5)  (ARG130)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |Response regulatory protein StyR, N-terminal domain |Pseudomonas fluorescens [TaxId: 294]
 d1a0oa_ :     (LYS7)  (LEU127)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |CheY protein |Escherichia coli [TaxId: 562]
 d1kgsa2 :     (VAL3)  (SER122)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |PhoB receiver domain |Thermotoga maritima [TaxId: 2336]
 d1dbwa_ :     (ASP3)  (SER119)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |Transcriptional regulatory protein FixJ, receiver domain |Rhizobium meliloti [TaxId: 382]
 d4q7ea_ :     (PRO3)  (ARG122)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Leptospira biflexa [TaxId: 355278]
 d1i3ca_ :     (LYS9)  (THR141)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |Response regulator for cyanobacterial phytochrome |Synechocystis sp. PCC 6803, RCP1 [TaxId: 1148]
 d1zgza1 :     (HIS3)  (ASP121)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |TorCAD operon transcriptional regulator TorD, N-terminal domain |Escherichia coli [TaxId: 562]
 d4le2c_ :     (SER3)  (GLY119)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Bacillus subtilis [TaxId: 224308]
 d3q15c_ :     (GLU4)  (LEU119)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |Sporulation response regulator Spo0F |Bacillus subtilis [TaxId: 1423]
 d1f4vc_ :     (LEU6)  (LEU127)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |CheY protein |Escherichia coli [TaxId: 562]
 d1ehca_ :     (LEU6)  (GLY128)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |CheY protein |Escherichia coli [TaxId: 562]
 d4le0a_ :     (SER3)  (GLY119)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Bacillus subtilis [TaxId: 224308]
 d4le1b_ :     (ILE2)  (GLY119)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Bacillus subtilis [TaxId: 224308]
 d3nnsa_ :     (TRP3)  (ARG117)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
 d3luaa_ :     (GLY3)  (LEU123)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Clostridium thermocellum [TaxId: 203119]
 d1udra_ :     (LYS7)  (GLY128)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |CheY protein |Escherichia coli [TaxId: 562]
 d3h5ia_ :     (LYS4)  (HIS128)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Carboxydothermus hydrogenoformans [TaxId: 246194]
 d3rvma_ :     (LYS7)  (LEU127)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d6chya_ :     (LYS7)  (LYS126)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |CheY protein |Escherichia coli [TaxId: 562]
 d3khta_ :    (LYS15)  (VAL141)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Hahella chejuensis [TaxId: 349521]
 d1ymva_ :     (LEU6)  (GLY128)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |CheY protein |Escherichia coli [TaxId: 562]
 d4hnqa_ :    (LYS10)  (GLU128)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |automated matches |Vibrio cholerae [TaxId: 666]
 d1xhfa_ :     (PRO4)  (THR121)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
 d1dcma_ :     (TYR4)  (VAL123)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |Transcriptional regulatory protein FixJ, receiver domain |Rhizobium meliloti [TaxId: 382]
 d3rvoa_ :     (LEU6)  (GLY128)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3hdga_ :    (LYS10)  (GLU131)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Wolinella succinogenes [TaxId: 844]
 d2vuhb_ :     (ALA5)  (LEU126)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Rhodobacter capsulatus [TaxId: 1061]
 d1e6ma_ :     (LYS7)  (GLY128)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |CheY protein |Escherichia coli [TaxId: 562]
 d1tmya_ :     (ARG4)  (SER119)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |CheY protein |Thermotoga maritima [TaxId: 2336]
 d2qv0a_ :    (MET58)  (GLN179)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
 d3cz5c_ :     (ALA6)  (GLY125)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Aurantimonas sp. [TaxId: 314269]
 d1l5ya_ :     (PRO5)  (ALA136)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |Transcriptional regulatory protein DctD, receiver domain |Rhizobium meliloti (Sinorhizobium meliloti) [TaxId: 382]
 d1ny5a1 :     (MET1)  (LEU134)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |Transcriptional activator sigm54 (NtrC1), N-terminal domain |Aquifex aeolicus [TaxId: 63363]
 d3olva_ :     (LEU6)  (GLY128)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |CheY protein |Escherichia coli [TaxId: 562]
 d1nata_ :     (GLU4)  (PRO120)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |Sporulation response regulator Spo0F |Bacillus subtilis [TaxId: 1423]
 d1heya_ :     (LEU6)  (LEU127)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |CheY protein |Escherichia coli [TaxId: 562]
 d1xheb_ :     (PRO4)  (THR121)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
 d5chya_ :     (LEU6)  (GLY128)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |CheY protein |Escherichia coli [TaxId: 562]
 d1dbwb_ :     (TYR4)  (LEU122)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |Transcriptional regulatory protein FixJ, receiver domain |Rhizobium meliloti [TaxId: 382]
 d1l5yb_ :   (PRO205)  (LYS344)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |Transcriptional regulatory protein DctD, receiver domain |Rhizobium meliloti (Sinorhizobium meliloti) [TaxId: 382]
 d1zh4a_ :     (THR2)  (HIS119)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
 d1p2fa2 :     (LYS4)  (LEU115)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |Response regulator DrrB |Thermotoga maritima [TaxId: 2336]
 d1xhfb_ :     (PRO4)  (THR121)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
 d3hv2a_ :    (PRO13)  (LEU139)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 220664]
 d1a2oa1 :     (ARG5)  (ALA133)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |Methylesterase CheB, N-terminal domain |Salmonella typhimurium [TaxId: 90371]
 d1l5za_ :     (SER6)  (ALA147)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |Transcriptional regulatory protein DctD, receiver domain |Rhizobium meliloti (Sinorhizobium meliloti) [TaxId: 382]
 d1d4za_ :     (LYS7)  (LEU127)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |CheY protein |Escherichia coli [TaxId: 562]
 d2plna_ :     (SER0)  (ARG114)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Helicobacter pylori [TaxId: 210]
 d4le0b_ :     (SER3)  (GLY119)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Bacillus subtilis [TaxId: 224308]
 d3eula_ :    (ARG10)  (LYS127)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d2chea_ :     (LYS7)  (GLY128)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |CheY protein |Salmonella typhimurium [TaxId: 90371]
 d3cz5a_ :     (SER4)  (GLY125)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Aurantimonas sp. [TaxId: 314269]
 d1udrb_ :     (LYS7)  (GLY128)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |CheY protein |Escherichia coli [TaxId: 562]
 d3ktoc_ :    (PRO12)  (GLY131)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Pseudoalteromonas atlantica [TaxId: 342610]
 d4q7eb_ :     (PRO3)  (SER119)   [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Leptospira biflexa [TaxId: 355278]
 d1ab6a_ :     (LYS7)  (LEU127)   [view usage] : c.23.1.1 |Flavodoxin-like |CheY-like |CheY-related |CheY protein |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.23