Protein Concepts Dictionary

Tableau information

Concept source:  d1kyve_  amino acid (a.a.) range (ARG19)(LEU158)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ARG19)   (ALA25) E1
	   (LEU29)   (ASP48) H2
	   (ILE54)   (PRO60) E3
	   (GLY61)   (ARG75) H4
	   (ASP79)   (LYS89) E5
	   (MET93)  (GLY114) H6
	  (VAL115)  (LEU119) E7
	  (GLY120)  (VAL124) E8
	  (GLU127)  (GLY135) H9
	  (HIS142)  (LEU158) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
H2      169.5°   H2                                                             
E3      -19.5°  167.1°   E3                                                      
H4      154.9°  -35.5°  139.1°   H4                                               
E5      -15.0°  154.6°  -32.0°  169.8°   E5                                        
H6      163.1°  -27.1°  144.3°   11.9° -173.8°   H6                                 
E7      -41.2°  128.6°  -59.3°  160.4°  -27.3° -155.7°   E7                          
E8      -24.3°  145.8°  -37.6° -174.1°   10.9° -164.9°  -24.9°   E8                   
H9     -159.4°   15.7° -176.2°  -39.9° -148.3°  -35.9°  121.2°  143.8°   H9            
H10     139.6°  -48.4°  120.2°  -30.5°  148.0°  -26.2°  160.4°  143.6°   60.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2a57a_ :    (ARG19)  (LEU158)   [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |automated matches |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
 d1kz6c_ :    (ARG19)  (LEU158)   [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |Lumazine synthase |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
 d1kz1e_ :    (ARG19)  (ALA157)   [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |Lumazine synthase |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
 d1kz1c_ :    (ARG19)  (TYR159)   [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |Lumazine synthase |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
 d1kyvc_ :    (ARG19)  (ALA157)   [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |Lumazine synthase |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
 d1kz1b_ :    (ARG19)  (ALA157)   [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |Lumazine synthase |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
 d1kz6a_ :    (ARG19)  (LEU158)   [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |Lumazine synthase |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
 d1kyve_ :    (ARG19)  (LEU158)   [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |Lumazine synthase |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.16