Protein Concepts Dictionary

Tableau information

Concept source:  d3prlb_  amino acid (a.a.) range (PRO390)(ALA484)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (PRO390)  (ARG396) E1
	  (ASP399)  (GLN409) H2
	  (LEU414)  (THR420) E3
	  (ASP422)  (LEU433) H4
	  (GLY436)  (ASN441) E5
	  (GLU445)  (PHE451) H6
	  (PHE451)  (LYS457) E7
	  (LEU461)  (ILE466) E8
	  (PRO468)  (THR474) H9
	  (ARG475)  (ALA484) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
H2      137.0°   H2                                                             
E3      -52.1°  170.2°   E3                                                      
H4      107.3°  -30.4°  156.5°   H4                                               
E5      -77.3°  143.7°  -26.5°  158.2°   E5                                        
H6      101.6°  -78.7°  104.3°  -90.0°  110.2°   H6                                 
E7       68.0°  -77.7°  106.8°   50.2° -116.8° -127.1°   E7                          
E8     -118.1°  100.9°  -72.8° -130.7°   57.5°  -63.9°  167.5°   E8                   
H9      106.1°  -32.4°  157.4°  -18.8° -175.8°  -71.7°   63.2° -121.6°   H9            
E10     -81.8°  -89.7°   96.1°  -91.1°  110.7°   20.5° -114.3°   78.0°   72.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3rhhc_ :   (PRO390)  (ASN482)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Bacillus halodurans [TaxId: 86665]
 d3prla_ :   (PRO390)  (LEU483)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Bacillus halodurans [TaxId: 86665]
 d3prld_ :   (PRO390)  (TYR488)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Bacillus halodurans [TaxId: 86665]
 d3prlb_ :   (PRO390)  (ALA484)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Bacillus halodurans [TaxId: 86665]
 d2bhpa_ :   (PRO421)  (ARG515)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d1uzba_ :   (PRO421)  (ARG515)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |1-pyrroline-5-carboxylate dehydrogenase |Thermus thermophilus [TaxId: 274]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.82