Protein Concepts Dictionary

Tableau information

Concept source:  d2w3va_  amino acid (a.a.) range (VAL6)(GLU124)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EHEHEEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (VAL6)   (ALA11) E1
	   (GLU30)   (VAL38) H2
	   (HIS42)   (GLY47) E3
	   (GLY47)   (SER53) H4
	   (ARG65)   (SER70) E5
	   (GLY79)   (GLY84) E6
	   (LEU86)   (ALA93) H7
	   (PRO97)  (GLY103) E8
	  (ALA105)  (ALA111) H9
	  (THR116)  (GLU124) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
H2     -171.1°   H2                                                             
E3      -70.0°  115.5°   E3                                                      
H4       46.2° -125.0°  106.4°   H4                                               
E5      -82.2°  104.1°  -13.2° -119.6°   E5                                        
E6     -111.6°   77.0°  -52.6° -157.0°  -40.0°   E6                                 
H7      107.1°  -65.7°  165.6°   65.1°  166.9°  137.4°   H7                          
E8      -38.6° -146.0°  -31.6°   77.5°  -44.2°  -79.8°  142.6°   E8                   
H9     -150.0°   35.8°  114.7° -138.7°  101.6°   62.5°  -75.1° -141.1°   H9            
E10       2.7°  172.5°  -70.5°   47.5°  -82.4° -110.5°  107.3°  -39.3° -147.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1tdra_ :     (MET1)  (ASP116)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductase, prokaryotic type |Escherichia coli [TaxId: 562]
 d4ixfx_ :     (SER6)  (LYS148)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductases, eukaryotic type |Fungus (Pneumocystis carinii) [TaxId: 4754]
 d4cd2a_ :     (SER6)  (LYS148)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductases, eukaryotic type |Fungus (Pneumocystis carinii) [TaxId: 4754]
 d4kl9a_ :     (MET1)  (ASP116)   [view usage] : c.71.1.0 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d3hj3d1 :     (GLU3)  (LEU138)   [view usage] : c.71.1.0 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |automated matches |automated matches |Cryptosporidium hominis [TaxId: 237895]
 d1df7a_ :     (MET1)  (ASP116)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductase, prokaryotic type |Mycobacterium tuberculosis [TaxId: 1773]
 d4or7a_ :     (MET1)  (ASP116)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |automated matches |Klebsiella pneumoniae [TaxId: 1244085]
 d3ix9a_ :     (ILE5)  (ALA123)   [view usage] : c.71.1.0 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |automated matches |automated matches |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
 d1draa_ :     (MET1)  (ASP116)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductase, prokaryotic type |Escherichia coli [TaxId: 562]
 d3data_ :     (VAL3)  (HIS119)   [view usage] : c.71.1.0 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |automated matches |automated matches |Bacillus anthracis [TaxId: 260799]
 d1dhia_ :     (MET1)  (ASP116)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductase, prokaryotic type |Escherichia coli [TaxId: 562]
 d3ia4a_ :     (VAL3)  (GLU118)   [view usage] : c.71.1.0 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |automated matches |automated matches |Moritella profunda [TaxId: 111291]
 d1drba_ :     (MET1)  (ASP116)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductase, prokaryotic type |Escherichia coli [TaxId: 562]
 d4klxa_ :     (VAL2)  (ASP116)   [view usage] : c.71.1.0 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d2ciga_ :     (MET1)  (ASP116)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductase, prokaryotic type |Mycobacterium tuberculosis [TaxId: 1773]
 d2w3va_ :     (VAL6)  (GLU124)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |automated matches |Mycobacterium avium [TaxId: 1764]
 d3qlwa_ :     (ASN5)  (PRO138)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductases, eukaryotic type |Yeast (Candida albicans) [TaxId: 5476]
 d2zzaa_ :     (VAL3)  (GLU118)   [view usage] : c.71.1.0 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |automated matches |automated matches |Moritella profunda [TaxId: 111291]
 d2drca_ :     (MET1)  (ASP116)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductase, prokaryotic type |Escherichia coli [TaxId: 562]
 d1drfa_ :     (LEU4)  (GLN140)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductases, eukaryotic type |Human (Homo sapiens) [TaxId: 9606]
 d1drea_ :     (MET1)  (ASP116)   [view usage] : c.71.1.1 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |Dihydrofolate reductases |Dihydrofolate reductase, prokaryotic type |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.71