Protein Concepts Dictionary

Tableau information

Concept source:  d1e60a2  amino acid (a.a.) range (LYS426)(GLY553)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EHEHEEEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LYS426)  (GLY432) E1
	  (ARG442)  (LEU452) H2
	  (GLU453)  (ASP459) E3
	  (THR463)  (ALA469) H4
	  (ASP470)  (PRO474) E5
	  (ASP483)  (GLY488) E6
	  (GLY494)  (LYS500) E7
	  (ASP511)  (GLY523) H8
	  (LYS524)  (GLU530) H9
	  (ASP533)  (GLY553) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
H2     -121.9°   H2                                                             
E3       -5.8°  116.2°   E3                                                      
H4     -143.8°  -34.2° -139.2°   H4                                               
E5      -21.7°  100.7°  -16.1° -127.5°   E5                                        
E6      -72.6°  145.6°  -77.3°  143.5°  -87.9°   E6                                 
E7      103.8°  -64.7°  101.8°  -47.0°   99.6°  147.1°   E7                          
H8     -146.8°   26.7°  141.1°   28.6°  125.0°  126.5°  -74.5°   H8                   
H9      -34.2°  138.9°  -38.1° -173.1°  -48.1°   39.9° -135.3°  146.4°   H9            
H10     -66.3°  116.7°  -68.0°  140.0°  -69.9°   35.8° -169.5°  111.6°  -36.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1dmra2 :   (LYS426)  (GLY553)   [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Dimethylsulfoxide reductase (DMSO reductase) |Rhodobacter capsulatus [TaxId: 1061]
 d1e18a2 :   (LYS426)  (ALA552)   [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Dimethylsulfoxide reductase (DMSO reductase) |Rhodobacter capsulatus [TaxId: 1061]
 d1tmoa2 :   (LYS435)  (ASN558)   [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Trimethylamine N-oxide reductase |Shewanella massilia [TaxId: 76854]
 d1e60a2 :   (LYS426)  (GLY553)   [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Dimethylsulfoxide reductase (DMSO reductase) |Rhodobacter capsulatus [TaxId: 1061]
 d1ti2a2 :   (LYS491)  (LYS637)   [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Transhydroxylase alpha subunit, AthL |Pelobacter acidigallici [TaxId: 35816]
 d1aa6a2 :   (ARG396)  (GLY521)   [view usage] : c.81.1.1 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase/DMSO reductase, domains 1-3 |Formate dehydrogenase H |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.81