Protein Concepts Dictionary

Tableau information

Concept source:  d2wmea_  amino acid (a.a.) range (PRO391)(GLY484)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EHEHEEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (PRO391)  (VAL397) E1
	  (GLU401)  (ASP410) H2
	  (LEU415)  (THR421) E3
	  (ASP423)  (LEU434) H4
	  (GLY437)  (ASN442) E5
	  (GLY445)  (ALA449) E6
	  (GLU450)  (GLY455) E7
	  (VAL461)  (ASN465) E8
	  (THR468)  (TYR473) H9
	  (TYR473)  (GLY484) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
H2      141.8°   H2                                                             
E3      -52.9°  164.7°   E3                                                      
H4      114.6°  -27.4°  165.3°   H4                                               
E5      -74.9°  141.0°  -23.8°  159.6°   E5                                        
E6      114.9°  -66.2°  115.1°  -76.1°  117.5°   E6                                 
E7       76.3°  -75.7°  110.9°   55.3° -114.0° -128.4°   E7                          
E8     -109.7°  106.0°  -62.6° -132.1°   51.0°  -69.4°  158.0°   E8                   
H9      126.8°  -18.3°  173.2°  -19.4° -158.2°  -58.2°   74.6° -113.9°   H9            
E10     -80.0°  -86.2°  103.6°  -79.5°  120.6°   36.8° -110.7°   91.2°   70.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.8°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3i44a_ :   (PRO386)  (SER474)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Bartonella henselae [TaxId: 38323]
 d4jz6a_ :   (PRO383)  (GLU475)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pseudomonas putida [TaxId: 303]
 d3iwkc_ :   (PRO397)  (SER490)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pea (Pisum sativum) [TaxId: 3888]
 d4dalb_ :   (PRO382)  (ASN473)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
 d4o5ha_ :   (PRO410)  (ALA503)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d3iwkl_ :   (PRO397)  (SER490)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pea (Pisum sativum) [TaxId: 3888]
 d4o5hc_ :   (PRO410)  (ALA503)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d3iwkh_ :   (PRO397)  (SER490)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pea (Pisum sativum) [TaxId: 3888]
 d2wmea_ :   (PRO391)  (GLY484)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d3iwka_ :   (PRO397)  (SER490)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pea (Pisum sativum) [TaxId: 3888]
 d3iwja_ :   (PRO397)  (SER490)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pea (Pisum sativum) [TaxId: 3888]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.82