Protein Concepts Dictionary

Tableau information

Concept source:  d2j3ga_  amino acid (a.a.) range (PHE120)(GLN237)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EHEHEEEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (PHE120)  (VAL124) E1
	  (ASP133)  (GLN139) H2
	  (GLY146)  (ASN152) E3
	  (ASN152)  (LEU158) H4
	  (GLU165)  (VAL171) E5
	  (ASP175)  (ARG183) E6
	  (ARG183)  (ASP189) E7
	  (ASN195)  (ALA200) E8
	  (ASN215)  (THR220) E9
	  (ASN231)  (GLN237) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
H2      106.9°   H2                                                             
E3     -157.5°  -94.2°   E3                                                      
H4     -126.1°   38.9°  -67.3°   H4                                               
E5        5.0°  110.2° -155.3°  131.0°   E5                                        
E6      166.8°  -82.1°   12.2°  -55.9°  166.5°   E6                                 
E7      105.7° -124.4°  -66.7° -127.7°  100.7°   75.5°   E7                          
E8      -78.7°   55.9°  108.0°   48.4°  -83.7°   99.5°  174.6°   E8                   
E9       54.6°  114.6° -123.4°  153.2°   49.9° -131.0°  -56.7°  128.6°   E9            
H10      24.4°   83.4°  177.2°  110.0°   26.9° -165.2° -115.8°   69.5°  -59.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2jhlf_ :   (PHE129)  (GLN246)   [view usage] : d.171.1.0 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4r9ja_ :   (PHE120)  (GLN237)   [view usage] : d.171.1.0 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2j0gf_ :   (PHE120)  (PHE236)   [view usage] : d.171.1.0 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2j0gb_ :   (PHE120)  (GLN237)   [view usage] : d.171.1.0 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4r9tb_ :   (PHE120)  (GLN237)   [view usage] : d.171.1.0 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2j3od_ :   (PHE120)  (GLN237)   [view usage] : d.171.1.0 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2j0gc_ :   (PHE120)  (PHE236)   [view usage] : d.171.1.0 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2j0gd_ :   (PHE120)  (GLN237)   [view usage] : d.171.1.0 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2j0ga_ :   (PHE120)  (PHE236)   [view usage] : d.171.1.0 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2j0ge_ :   (PHE120)  (GLN237)   [view usage] : d.171.1.0 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4jyox_ :    (ILE48)  (GLY202)   [view usage] : d.171.1.0 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2j3ga_ :   (PHE120)  (GLN237)   [view usage] : d.171.1.0 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.171