Protein Concepts Dictionary

Tableau information

Concept source:  d2bamb_  amino acid (a.a.) range (GLU77)(PHE179)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EHEEHEHHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLU77)   (ASP81) E1
	   (ASP81)   (LYS87) H2
	   (LYS89)  (GLU101) E3
	  (SER103)  (THR114) E4
	  (ASN116)  (GLY134) H5
	  (LEU138)  (MET143) E6
	  (ILE145)  (TYR150) H7
	  (ASN158)  (GLU163) H8
	  (GLU163)  (THR169) H9
	  (PRO173)  (PHE179) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
H2      -52.3°   H2                                                             
E3       93.8° -134.9°   E3                                                      
E4     -123.5°  -87.8°  136.9°   E4                                               
H5       44.4°   81.5°  -54.5°  167.6°   H5                                        
E6     -140.9° -102.9°  120.5°  -17.7°  174.6°   E6                                 
H7     -128.7°  -76.8°  132.0°  -37.8°  143.0°   37.5°   H7                          
H8      -19.4°   60.2°  -98.4°  110.6°  -58.5°  126.3° -129.2°   H8                   
H9       36.7°   70.7°  -65.3°  157.5°  -10.9°  173.1°  136.2°   53.2°   H9            
E10    -161.9° -119.2°  101.0°  -39.0°  153.4°  -21.3°   44.0° -144.9°  161.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1bhmb_ :    (GLU77)  (PHE179)   [view usage] : c.52.1.3 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease BamHI |Restriction endonuclease BamHI |Bacillus amyloliquefaciens [TaxId: 1390]
 d1bhma_ :    (GLU77)  (PHE179)   [view usage] : c.52.1.3 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease BamHI |Restriction endonuclease BamHI |Bacillus amyloliquefaciens [TaxId: 1390]
 d2bamb_ :    (GLU77)  (PHE179)   [view usage] : c.52.1.3 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease BamHI |Restriction endonuclease BamHI |Bacillus amyloliquefaciens [TaxId: 1390]
 d2bama_ :    (GLU77)  (ALA183)   [view usage] : c.52.1.3 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease BamHI |Restriction endonuclease BamHI |Bacillus amyloliquefaciens [TaxId: 1390]
 d1esga_ :    (ASN73)  (PHE179)   [view usage] : c.52.1.3 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease BamHI |Restriction endonuclease BamHI |Bacillus amyloliquefaciens [TaxId: 1390]
 d3bama_ :    (ARG76)  (ALA183)   [view usage] : c.52.1.3 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease BamHI |Restriction endonuclease BamHI |Bacillus amyloliquefaciens [TaxId: 1390]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.52