Protein Concepts Dictionary

Tableau information

Concept source:  d2bf3a_  amino acid (a.a.) range (VAL13)(TYR97)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EHEEEHHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (VAL13)   (ARG18) E1
	   (VAL23)   (ILE32) H2
	   (GLU38)   (ARG44) E3
	   (TYR47)   (GLU53) E4
	   (GLY54)   (THR59) E5
	   (THR59)   (GLY68) H6
	   (GLN74)   (LEU80) H7
	   (ALA81)   (GLY85) E8
	   (GLY85)   (GLU91) E9
	   (GLN93)   (TYR97) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
H2      164.8°   H2                                                             
E3      -30.5°  164.4°   E3                                                      
E4      168.8°    4.0°  160.6°   E4                                               
E5       55.4°  112.5°  -82.2°  115.5°   E5                                        
H6      -36.5°  132.1°  -58.7°  135.5°  -61.5°   H6                                 
H7       80.3° -112.1°   53.5° -109.1°  135.3°   87.1°   H7                          
E8      177.6°  -16.6°  147.9°  -12.7° -126.8°  142.8°  -97.5°   E8                   
E9      -73.6°   95.3°  -98.7°   98.0°  -18.4°  -77.6° -152.2°  108.7°   E9            
E10     120.0°  -72.5°   92.6°  -69.4°  174.5°  117.1°  -39.8°   57.8°  164.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3dhie_ :    (VAL14)   (TYR98)   [view usage] : d.137.1.1 |Monooxygenase (hydroxylase) regulatory protein |Monooxygenase (hydroxylase) regulatory protein |Monooxygenase (hydroxylase) regulatory protein |Toluene-4-monooxygenase catalytic effector protein |Pseudomonas mendocina [TaxId: 300]
 d3ge8h_ :    (VAL14)   (TYR98)   [view usage] : d.137.1.1 |Monooxygenase (hydroxylase) regulatory protein |Monooxygenase (hydroxylase) regulatory protein |Monooxygenase (hydroxylase) regulatory protein |Toluene-4-monooxygenase catalytic effector protein |Pseudomonas mendocina [TaxId: 300]
 d2bf5a_ :    (VAL13)  (THR101)   [view usage] : d.137.1.1 |Monooxygenase (hydroxylase) regulatory protein |Monooxygenase (hydroxylase) regulatory protein |Monooxygenase (hydroxylase) regulatory protein |automated matches |Pseudomonas mendocina [TaxId: 300]
 d2bf3b_ :    (ASN11)   (TYR97)   [view usage] : d.137.1.1 |Monooxygenase (hydroxylase) regulatory protein |Monooxygenase (hydroxylase) regulatory protein |Monooxygenase (hydroxylase) regulatory protein |automated matches |Pseudomonas mendocina [TaxId: 300]
 d2bf3a_ :    (VAL13)   (TYR97)   [view usage] : d.137.1.1 |Monooxygenase (hydroxylase) regulatory protein |Monooxygenase (hydroxylase) regulatory protein |Monooxygenase (hydroxylase) regulatory protein |automated matches |Pseudomonas mendocina [TaxId: 300]
 d2innl_ :     (VAL5)   (GLU87)   [view usage] : d.137.1.1 |Monooxygenase (hydroxylase) regulatory protein |Monooxygenase (hydroxylase) regulatory protein |Monooxygenase (hydroxylase) regulatory protein |automated matches |Pseudomonas stutzeri [TaxId: 316]
 d4gamd_ :    (ASP36)  (THR126)   [view usage] : d.137.1.1 |Monooxygenase (hydroxylase) regulatory protein |Monooxygenase (hydroxylase) regulatory protein |Monooxygenase (hydroxylase) regulatory protein |Soluble methane monooxygenase regulatory protein B |Methylococcus capsulatus [TaxId: 243233]
 d2bf2b_ :    (GLY14)  (THR101)   [view usage] : d.137.1.1 |Monooxygenase (hydroxylase) regulatory protein |Monooxygenase (hydroxylase) regulatory protein |Monooxygenase (hydroxylase) regulatory protein |Toluene-4-monooxygenase catalytic effector protein |Pseudomonas mendocina [TaxId: 300]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.137