Protein Concepts Dictionary

Tableau information

Concept source:  d3o9qb_  amino acid (a.a.) range (ALA86)(SER205)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EHEEEEEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ALA86)   (THR91) E1
	   (THR94)   (SER99) H2
	  (ILE106)  (VAL111) E3
	  (PRO114)  (ASP120) E4
	  (ASN127)  (ASN133) E5
	  (ILE145)  (THR151) E6
	  (VAL157)  (PRO162) E7
	  (ALA171)  (ASP189) H8
	  (THR191)  (SER195) E9
	  (SER195)  (SER205) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
H2       90.4°   H2                                                             
E3      150.7°  -88.0°   E3                                                      
E4      -19.0°   95.2°  168.7°   E4                                               
E5     -169.5°  -92.3°  -39.6°  150.6°   E5                                        
E6       -8.7°   98.0°  154.5°  -14.3°  162.3°   E6                                 
E7      163.3°  -78.8°  -18.7°  171.8°  -26.5°  171.0°   E7                          
H8      -11.1°   83.9°  158.2°  -14.7°  160.6°  -14.9°  162.3°   H8                   
E9      148.9° -118.4°  -49.9°  135.4°  -26.2°  140.3°  -46.3°  150.1°   E9            
H10    -127.8°  -75.1°   24.9° -146.7°   62.7° -134.0°   37.2° -133.5°   74.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3d6rb1 :    (ALA86)  (ARG200)   [view usage] : d.299.1.1 |Ns1 effector domain-like |Ns1 effector domain-like |Ns1 effector domain-like |automated matches |Influenza A virus [TaxId: 381517]
 d2gx9b_ :    (ALA86)  (ASN207)   [view usage] : d.299.1.1 |Ns1 effector domain-like |Ns1 effector domain-like |Ns1 effector domain-like |Non-structural protein NS1 C-terminal domain |Influenza A virus [TaxId: 11320]
 d3p38b_ :    (ALA81)  (ASN200)   [view usage] : d.299.1.1 |Ns1 effector domain-like |Ns1 effector domain-like |Ns1 effector domain-like |automated matches |Influenza A virus [TaxId: 680789]
 d3o9ra_ :    (ALA86)  (PHE201)   [view usage] : d.299.1.1 |Ns1 effector domain-like |Ns1 effector domain-like |Ns1 effector domain-like |automated matches |Influenza A virus [TaxId: 381517]
 d3o9qa_ :    (PRO85)  (ALA202)   [view usage] : d.299.1.1 |Ns1 effector domain-like |Ns1 effector domain-like |Ns1 effector domain-like |automated matches |Influenza A virus [TaxId: 381517]
 d2gx9a1 :    (ALA86)  (TRP203)   [view usage] : d.299.1.1 |Ns1 effector domain-like |Ns1 effector domain-like |Ns1 effector domain-like |Non-structural protein NS1 C-terminal domain |Influenza A virus [TaxId: 11320]
 d3o9qb_ :    (ALA86)  (SER205)   [view usage] : d.299.1.1 |Ns1 effector domain-like |Ns1 effector domain-like |Ns1 effector domain-like |automated matches |Influenza A virus [TaxId: 381517]
 d3p39d_ :    (ALA81)  (ALA197)   [view usage] : d.299.1.1 |Ns1 effector domain-like |Ns1 effector domain-like |Ns1 effector domain-like |automated matches |Influenza A virus [TaxId: 680789]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.299