Protein Concepts Dictionary

Tableau information

Concept source:  d1pg7w2  amino acid (a.a.) range (SER115)(SER206)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EHEEEEEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER115)  (PRO120) E1
	  (SER122)  (LYS127) H2
	  (LYS129)  (PRO142) E3
	  (ARG146)  (ALA151) E4
	  (GLY159)  (THR163) E5
	  (GLN164)  (SER168) E6
	  (LYS170)  (THR180) E7
	  (THR180)  (SER186) H8
	  (SER188)  (GLU197) E9
	  (GLY198)  (SER206) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
H2      -40.7°   H2                                                             
E3      178.3°  140.7°   E3                                                      
E4      -32.3°  -67.3°  147.2°   E4                                               
E5      146.3°  132.9°  -32.6°  151.0°   E5                                        
E6      123.4°  149.3°  -54.9°  112.4°   38.9°   E6                                 
E7      -17.8°  -37.6°  163.6°  -29.8°  163.2°  137.4°   E7                          
H8     -106.0° -126.4°   73.9°   74.0°  -98.3°  -79.6°   96.2°   H8                   
E9      157.9°  118.2°  -23.1°  165.3°  -35.5°  -70.5°  151.8°   92.9°   E9            
E10     -30.9°  -70.8°  147.4°  -30.6°  126.4°   93.8°  -43.9°  -93.5°  161.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4acpa2 :   (GLN342)  (SER442)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1etza2 :   (SER117)  (ALA212)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain lambda constant domain, CL-lambda |Mouse (Mus musculus) [TaxId: 10090]
 d2op4l2 :   (SER114)  (SER208)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1wejh2 :   (SER124)  (PRO216)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
 d1jnha2 :   (SER116)  (ALA211)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain lambda constant domain, CL-lambda |Mouse (Mus musculus) [TaxId: 10090]
 d1jn6a2 :   (SER117)  (SER210)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain lambda constant domain, CL-lambda |Mouse (Mus musculus) [TaxId: 10090]
 d4f57l2 :   (SER114)  (ALA207)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3q6gl2 :   (SER114)  (PRO208)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Rhesus monkey (Macaca mulatta) [TaxId: 9544]
 d4jamb2 :   (THR114)  (PRO208)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3qhzl2 :   (SER114)  (SER215)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3mlul2 :   (SER118)  (THR209)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4m5zl2 :   (SER114)  (PRO208)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4d9lm2 :   (THR114)  (PRO208)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4k3dm2 :   (SER114)  (LYS207)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Cow (Bos taurus) [TaxId: 9913]
 d1yuha2 :   (SER117)  (ALA212)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain lambda constant domain, CL-lambda |Mouse (Mus musculus) [TaxId: 10090]
 d1ngpl2 :   (SER117)  (ARG211)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain lambda constant domain, CL-lambda |Mouse (Mus musculus) [TaxId: 10090]
 d1ncwh2 :   (SER120)  (PRO227)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
 d1lgva2 :   (SER119)  (PRO213)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain lambda constant domain, CL-lambda |Human (Homo sapiens) [TaxId: 9606]
 d1rzfl2 :   (SER115)  (ALA208)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain lambda constant domain, CL-lambda |Human (Homo sapiens) [TaxId: 9606]
 d1nc2c2 :   (SER117)  (SER208)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain lambda constant domain, CL-lambda |Human (Homo sapiens) [TaxId: 9606]
 d1nl0l2 :   (SER115)  (THR206)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain lambda constant domain, CL-lambda |Human (Homo sapiens) [TaxId: 9606]
 d1pg7w2 :   (SER115)  (SER206)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain lambda constant domain, CL-lambda |Human (Homo sapiens) [TaxId: 9606]
 d2vxsm2 :   (SER115)  (ALA208)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4m1dm2 :   (SER114)  (PRO208)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1qblh2 :   (THR121)  (PRO216)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma |Mouse (Mus musculus) [TaxId: 10090]
 d3mj9l2 :   (SER114)  (PRO211)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Cricetulus migratorius [TaxId: 10032]
 d4od3l2 :   (THR114)  (THR209)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2ntfa2 :   (SER114)  (ARG211)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d4m1dl2 :   (SER114)  (ALA207)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1f4wl2 :   (SER117)  (SER210)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain lambda constant domain, CL-lambda |Mouse (Mus musculus) [TaxId: 10090]
 d8faba2 :   (SER114)  (PRO208)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain lambda constant domain, CL-lambda |Human (Homo sapiens) [TaxId: 9606]
 d4isva2 :   (THR123)  (ALA217)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d4amkl2 :   (SER117)  (ARG211)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d3mugk2 :   (SER114)  (PRO211)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1indl2 :   (SER117)  (ALA212)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain lambda constant domain, CL-lambda |Mouse (Mus musculus) [TaxId: 10090]
 d3gjea2 :   (THR117)  (PRO211)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4tvpl2 :   (SER115)  (THR210)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3zl4l2 :   (SER117)  (ALA210)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3ffdb2 :   (THR123)  (ALA217)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1jvka2 :   (SER119)  (ALA212)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain lambda constant domain, CL-lambda |Human (Homo sapiens) [TaxId: 9606]
 d4od1l2 :   (THR114)  (PRO208)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3gbml2 :   (SER114)  (PRO211)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3ma9l2 :   (SER116)  (ALA209)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4janb2 :   (THR114)  (ALA207)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1mfel2 :   (SER117)  (ARG211)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain lambda constant domain, CL-lambda |Mouse (Mus musculus) [TaxId: 10090]
 d1sm3l2 :   (SER114)  (ARG208)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain lambda constant domain, CL-lambda |Mouse (Mus musculus) [TaxId: 10090]
 d1aqkl2 :   (SER118)  (PRO212)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain lambda constant domain, CL-lambda |Human (Homo sapiens) [TaxId: 9606]
 d3mj8a2 :   (SER114)  (PRO211)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Cricetulus migratorius [TaxId: 10032]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   b.1