Protein Concepts Dictionary

Tableau information

Concept source:  d1n2me_  amino acid (a.a.) range (ASN16)(TYR164)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EHEEEEEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASN16)   (GLU26) E1
	   (THR29)   (GLY42) H2
	   (SER52)   (GLU58) E3
	   (GLU58)   (PRO63) E4
	   (TYR77)   (ASP83) E5
	   (GLU87)   (PRO98) E6
	  (SER102)  (GLY112) E7
	  (SER115)  (GLY135) H8
	  (ASP139)  (THR149) E9
	  (LYS152)  (TYR164) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
H2      127.8°   H2                                                             
E3     -141.9°  -16.2°   E3                                                      
E4      -34.2°   97.2°  108.8°   E4                                               
E5        4.3°  132.0° -146.2°  -38.3°   E5                                        
E6     -174.5°  -49.3°  -36.3° -145.1°  174.5°   E6                                 
E7        6.1°  131.9°  146.7°   40.1°    3.5°  171.1°   E7                          
H8      149.4°  -80.7°  -68.3°  174.9°  145.2°  -31.9°  143.7°   H8                   
E9       16.1°  129.4°  139.2°   32.4°  -16.6°  168.8°  -20.1°  148.9°   E9            
E10     170.1°  -49.5°   33.9°  137.7° -171.5°  -13.8° -175.0°  -38.0°  154.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2qqdh_ :    (ASN16)  (TYR164)   [view usage] : d.155.1.2 |Pyruvoyl-dependent histidine and arginine decarboxylases |Pyruvoyl-dependent histidine and arginine decarboxylases |Arginine decarboxylase |automated matches |Methanocaldococcus jannaschii [TaxId: 2190]
 d1n2mc_ :    (ASN16)  (TYR164)   [view usage] : d.155.1.2 |Pyruvoyl-dependent histidine and arginine decarboxylases |Pyruvoyl-dependent histidine and arginine decarboxylases |Arginine decarboxylase |Arginine decarboxylase |Methanococcus jannaschii [TaxId: 2190]
 d1n2mb_ :    (ASN16)  (TYR164)   [view usage] : d.155.1.2 |Pyruvoyl-dependent histidine and arginine decarboxylases |Pyruvoyl-dependent histidine and arginine decarboxylases |Arginine decarboxylase |Arginine decarboxylase |Methanococcus jannaschii [TaxId: 2190]
 d1n2mf_ :    (ASN16)  (TYR164)   [view usage] : d.155.1.2 |Pyruvoyl-dependent histidine and arginine decarboxylases |Pyruvoyl-dependent histidine and arginine decarboxylases |Arginine decarboxylase |Arginine decarboxylase |Methanococcus jannaschii [TaxId: 2190]
 d1n2md_ :    (ASN16)  (TYR164)   [view usage] : d.155.1.2 |Pyruvoyl-dependent histidine and arginine decarboxylases |Pyruvoyl-dependent histidine and arginine decarboxylases |Arginine decarboxylase |Arginine decarboxylase |Methanococcus jannaschii [TaxId: 2190]
 d1n2me_ :    (ASN16)  (TYR164)   [view usage] : d.155.1.2 |Pyruvoyl-dependent histidine and arginine decarboxylases |Pyruvoyl-dependent histidine and arginine decarboxylases |Arginine decarboxylase |Arginine decarboxylase |Methanococcus jannaschii [TaxId: 2190]
 d1n2ma_ :    (ASN16)  (TYR164)   [view usage] : d.155.1.2 |Pyruvoyl-dependent histidine and arginine decarboxylases |Pyruvoyl-dependent histidine and arginine decarboxylases |Arginine decarboxylase |Arginine decarboxylase |Methanococcus jannaschii [TaxId: 2190]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.155