Protein Concepts Dictionary

Tableau information

Concept source:  d2nw2b2  amino acid (a.a.) range (GLU127)(ASP247)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EHEEEEEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLU127)  (PRO133) E1
	  (SER134)  (HIS140) H2
	  (LYS143)  (LEU149) E3
	  (HIS157)  (ASN165) E4
	  (GLY172)  (ASP176) E5
	  (PRO177)  (GLN183) E6
	  (TYR191)  (SER200) E7
	  (SER200)  (ASN206) H8
	  (ARG208)  (TYR218) E9
	  (THR235)  (ASP247) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
H2      -39.9°   H2                                                             
E3      164.7°  151.3°   E3                                                      
E4      -41.9°  -58.7°  143.4°   E4                                               
E5      137.5°  135.7°  -30.8°  161.9°   E5                                        
E6      114.5°  149.5°  -50.8°  117.5°   44.3°   E6                                 
E7      -30.4°  -36.8°  161.6°  -22.0°  167.6°  134.0°   E7                          
H8     -118.3° -137.2°   61.4°   82.2°  -86.4°  -62.5°  103.3°   H8                   
E9      149.7°  122.2°  -30.6°  164.9°  -28.0°  -70.0°  155.8°  -90.9°   E9            
E10     -17.9°  -55.0°  153.5°  -31.7°  139.7°  104.5°  -31.5° -100.8°  163.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1lp9f2 :   (LYS126)  (ALA245)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |T-cell antigen receptor |Mouse (Mus musculus), beta-chain [TaxId: 10090]
 d3zo0a2 :   (SER342)  (SER442)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d4nqch2 :   (GLU125)  (GLU239)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2ialb2 :   (GLU120)  (ALA239)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3rgvb2 :   (GLU120)  (GLU234)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d3o8xd2 :   (LYS121)  (ALA240)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d4p4kh2 :   (GLU123)  (GLU237)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4pjah2 :   (GLU123)  (GLY240)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2axha2 :   (GLU124)  (ALA243)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3qi9d2 :   (GLU127)  (GLU241)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1ktke2 :   (GLU126)  (ASP223)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |T-cell antigen receptor |Human (Homo sapiens), beta-chain [TaxId: 9606]
 d3axlb2 :   (GLU137)  (ALA256)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d3mffb2 :   (GLU124)  (SER243)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1mi5e2 :   (GLU127)  (ASP247)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |T-cell antigen receptor |Human (Homo sapiens), beta-chain [TaxId: 9606]
 d2vlje2 :   (GLU124)  (ASP244)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |T-cell antigen receptor |Human (Homo sapiens), beta-chain [TaxId: 9606]
 d1ow0a1 :   (ARG245)  (LYS340)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin heavy chain alpha constant domain 2, CH2-alpha |Human (Homo sapiens) [TaxId: 9606]
 d2ak4e2 :   (GLU127)  (ALA246)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |T-cell antigen receptor |Human (Homo sapiens), beta-chain [TaxId: 9606]
 d1l0xa2 :   (PRO125)  (TRP242)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |T-cell antigen receptor |Mouse (Mus musculus), beta-chain [TaxId: 10090]
 d3q5ta2 :   (LYS124)  (ASP240)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d3revb2 :   (GLU123)  (ALA242)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3q5ya2 :   (LYS126)  (ALA245)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d4pjch2 :   (GLU124)  (GLU238)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2xnab2 :   (GLU124)  (ALA243)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4qrre2 :   (ALA139)  (ALA256)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1qsee2 :   (GLU126)  (ASP246)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |T-cell antigen receptor |Human (Homo sapiens), beta-chain [TaxId: 9606]
 d2eyrb2 :   (GLU127)  (ASP247)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3hkfa1 :   (SER242)  (LYS341)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1qsfe2 :   (GLU126)  (ASP246)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |T-cell antigen receptor |Human (Homo sapiens), beta-chain [TaxId: 9606]
 d4p4kd2 :   (GLU123)  (ASP243)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1nfdb2 :   (LYS126)  (GLU240)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |T-cell antigen receptor |Mouse (Mus musculus), beta-chain [TaxId: 10090]
 d1qrne2 :   (GLU126)  (ALA245)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |T-cell antigen receptor |Human (Homo sapiens), beta-chain [TaxId: 9606]
 d3c60b2 :   (GLU120)  (TRP236)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d4gkzb2 :   (GLU123)  (ALA242)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ogae2 :   (GLU124)  (ASP244)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |T-cell antigen receptor |Human (Homo sapiens), beta-chain [TaxId: 9606]
 d4pjaf2 :   (GLU123)  (GLU237)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3qeub2 :   (GLU125)  (GLU239)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3argd2 :   (GLU127)  (ALA246)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1fyte2 :   (GLU127)  (ALA246)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |T-cell antigen receptor |Human (Homo sapiens), beta-chain [TaxId: 9606]
 d3of6a2 :   (GLU127)  (GLU241)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2cdfb2 :   (GLU125)  (ALA244)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2q86b2 :   (LYS120)  (ALA235)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |T-cell antigen receptor |Mouse (Mus musculus), beta-chain [TaxId: 10090]
 d3sddd2 :   (GLU127)  (GLU241)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d2nw2b2 :   (GLU127)  (ASP247)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2pyfb2 :   (GLU121)  (ASP241)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4eurb2 :   (GLU123)  (ALA242)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3mbed2 :   (LYS137)  (ALA252)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d2axja2 :   (GLU124)  (GLU238)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2bnqe2 :   (GLU122)  (ALA241)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |T-cell antigen receptor |Human (Homo sapiens), beta-chain [TaxId: 9606]
 d1g6rb2 :   (LYS126)  (ALA245)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |T-cell antigen receptor |Mouse (Mus musculus), beta-chain [TaxId: 10090]
 d1zglv2 :   (GLU127)  (GLY244)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |T-cell antigen receptor |Human (Homo sapiens), beta-chain [TaxId: 9606]
 d1zglr2 :   (ALA129)  (ALA240)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |T-cell antigen receptor |Human (Homo sapiens), beta-chain [TaxId: 9606]
 d4apqd2 :   (GLU127)  (GLY244)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   b.1