Protein Concepts Dictionary

Tableau information

Concept source:  d1hr6a2  amino acid (a.a.) range (GLU314)(GLY454)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EEHHHHHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLU314)  (SER324) E1
	  (ASP325)  (CYS335) E2
	  (ALA339)  (ASN353) H3
	  (ASN357)  (ARG361) H4
	  (THR363)  (GLU383) H5
	  (SER384)  (MET398) H6
	  (VAL405)  (LEU415) H7
	  (PRO417)  (GLY430) H8
	  (GLY440)  (MET446) E9
	  (ASP449)  (GLY454) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
E2      171.4°   E2                                                             
H3      -54.7°  133.2°   H3                                                      
H4      -76.7°  105.2°  -53.3°   H4                                               
H5      -64.0°  108.8°  -98.4°  -65.3°   H5                                        
H6      -47.2°  134.1°  -73.2° -119.0° -100.6°   H6                                 
H7      127.7°  -58.8°   94.6° -121.2°  166.5°   86.6°   H7                          
H8       88.3°  -86.1° -135.1°  149.4°   84.3°   62.3°  -89.1°   H8                   
E9      131.5°  -40.5°  145.6°   93.1°   68.7°  139.0°  -98.3°  -77.1°   E9            
H10     -94.9°   93.7°  -48.5°   84.4° -145.8°  -79.7°   46.5° -123.8°  131.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1ezva1 :    (ALA91)  (SER224)   [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Cytochrome bc1 core subunit 1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1hr6a2 :   (GLU314)  (GLY454)   [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Mitochondrial processing peptidase (MPP) alpha chain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1be3b1 :    (GLY93)  (PHE223)   [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Cytochrome bc1 core subunit 2 |Cow (Bos taurus) [TaxId: 9913]
 d1kb9a1 :    (ALA92)  (ASN227)   [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Cytochrome bc1 core subunit 1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1hr6c2 :   (GLU314)  (GLY454)   [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Mitochondrial processing peptidase (MPP) alpha chain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.185