Protein Concepts Dictionary

Tableau information

Concept source:  d1o26c_  amino acid (a.a.) range (MET1)(ILE148)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EEHHHEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (MET1)    (LEU6) E1
	    (LYS8)   (GLY18) E2
	   (LEU21)   (ALA27) H3
	   (GLU38)   (GLY52) H4
	   (GLU54)   (ILE60) H5
	   (ILE60)   (HIS65) E6
	   (ILE70)   (ARG80) H7
	   (ALA82)   (SER88) E8
	  (PRO114)  (GLY140) H9
	  (PRO142)  (ILE148) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
E2      152.8°   E2                                                             
H3     -109.8°   43.0°   H3                                                      
H4      -37.3°  115.9°   73.1°   H4                                               
H5      -95.0°  106.4°  133.5° -116.4°   H5                                        
E6      -51.2°  147.9° -142.5°  -79.1°  -43.9°   E6                                 
H7      127.7°  -25.1°   18.4°   91.4° -126.0° -154.1°   H7                          
E8      -58.4°  138.8°  138.5°  -82.6°   36.8°   -9.2° -146.7°   E8                   
H9      104.1°   75.5°   79.5°   90.8°  -56.1°  -76.1°   80.0°  -67.4°   H9            
H10      52.5° -123.5° -104.5°  -68.9°  121.6°   88.0° -111.2°   97.2°  156.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1o27a_ :     (HIS0)  (ILE148)   [view usage] : d.207.1.1 |Thymidylate synthase-complementing protein Thy1 |Thymidylate synthase-complementing protein Thy1 |Thymidylate synthase-complementing protein Thy1 |Thy1 homologue |Thermotoga maritima [TaxId: 2336]
 d3n0ba_ :     (HIS0)  (ILE148)   [view usage] : d.207.1.1 |Thymidylate synthase-complementing protein Thy1 |Thymidylate synthase-complementing protein Thy1 |Thymidylate synthase-complementing protein Thy1 |Thy1 homologue |Thermotoga maritima [TaxId: 2336]
 d1o24c_ :     (MET1)  (ILE148)   [view usage] : d.207.1.1 |Thymidylate synthase-complementing protein Thy1 |Thymidylate synthase-complementing protein Thy1 |Thymidylate synthase-complementing protein Thy1 |Thy1 homologue |Thermotoga maritima [TaxId: 2336]
 d4katb_ :     (MET1)  (ILE148)   [view usage] : d.207.1.1 |Thymidylate synthase-complementing protein Thy1 |Thymidylate synthase-complementing protein Thy1 |Thymidylate synthase-complementing protein Thy1 |Thy1 homologue |Thermotoga maritima [TaxId: 2336]
 d1o26c_ :     (MET1)  (ILE148)   [view usage] : d.207.1.1 |Thymidylate synthase-complementing protein Thy1 |Thymidylate synthase-complementing protein Thy1 |Thymidylate synthase-complementing protein Thy1 |Thy1 homologue |Thermotoga maritima [TaxId: 2336]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.207