Protein Concepts Dictionary

Tableau information

Concept source:  d8gpba_  amino acid (a.a.) range (ARG81)(ALA179)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EEHHHEHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ARG81)   (LEU87) E1
	   (LEU87)   (MET91) E2
	   (GLN96)  (LEU102) H3
	  (ASN106)  (GLY116) H4
	  (MET119)  (ILE125) H5
	  (ILE125)  (LEU131) E6
	  (GLY135)  (GLY151) H7
	  (ALA153)  (ILE159) E8
	  (ASN167)  (CYS171) E9
	  (TRP174)  (ALA179) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
E2       99.0°   E2                                                             
H3      161.8°   72.2°   H3                                                      
H4      -59.9°  -58.6°  123.1°   H4                                               
H5      -66.1° -162.2°  124.9°  104.1°   H5                                        
E6       95.0° -155.1°   88.4°  145.7°  -41.7°   E6                                 
H7     -163.8°  -66.9°  -23.9°  104.5°  126.0°  101.0°   H7                          
E8      -20.8° -109.7° -177.3°  -57.6°  -53.1°   90.4° -154.6°   E8                   
E9       23.1°  -81.8°  139.2°  -61.6°  -86.0°  105.0° -148.0°   43.5°   E9            
E10    -130.1°   97.7°  -67.7°   91.2°  -86.0°  -88.7°   48.7° -109.8°  148.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3gpba_ :    (ARG81)  (ALA179)   [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Glycogen phosphorylase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d1noja_ :    (ARG81)  (ALA179)   [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Glycogen phosphorylase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d4bqfb_ :    (GLN84)  (PRO182)   [view usage] : c.87.1.0 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d1c50a_ :    (ARG81)  (ALA179)   [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Glycogen phosphorylase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d2gpba_ :    (ARG81)  (ALA179)   [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Glycogen phosphorylase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d6gpba_ :    (ARG81)  (ALA179)   [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Glycogen phosphorylase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d8gpba_ :    (ARG81)  (ALA179)   [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Glycogen phosphorylase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d2amva_ :    (ARG81)  (ALA179)   [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Glycogen phosphorylase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d1axra_ :    (LYS80)  (ALA179)   [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Glycogen phosphorylase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d1gpba_ :    (ARG81)  (GLY172)   [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Glycogen phosphorylase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.87