Protein Concepts Dictionary

Tableau information

Concept source:  d1qrha_  amino acid (a.a.) range (VAL95)(HIS225)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EEHHEEEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (VAL95)  (ASP100) E1
	  (GLU103)  (HIS114) E2
	  (ASP118)  (ASN124) H3
	  (ASN141)  (MET157) H4
	  (SER161)  (GLY171) E5
	  (GLU177)  (ARG183) E6
	  (VAL189)  (TYR193) E7
	  (LEU201)  (TYR209) H8
	  (ASN214)  (ILE219) E9
	  (ILE219)  (HIS225) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
E2      169.9°   E2                                                             
H3      152.6°  -31.2°   H3                                                      
H4       -8.3° -177.4°  148.1°   H4                                               
E5      171.8°  -15.6°  -19.5°  165.0°   E5                                        
E6      148.5°  -41.6°   34.4°  140.2°  -28.2°   E6                                 
E7      -20.9°  150.0° -160.7°  -28.9°  165.4°  164.0°   E7                          
H8        5.2° -164.9° -154.7°  -13.5° -174.0°  153.5°  -16.0°   H8                   
E9      -22.3°  157.7° -168.1°  -23.8°  163.1° -139.1°   25.0°   22.6°   E9            
E10     -82.3°   90.1°  119.4°  -89.7°  105.3° -121.4°   61.8°  -77.7°  -72.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1ckqa_ :    (ILE94)  (HIS225)   [view usage] : c.52.1.1 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease EcoRI |Restriction endonuclease EcoRI |Escherichia coli [TaxId: 562]
 d1qrha_ :    (VAL95)  (HIS225)   [view usage] : c.52.1.1 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease EcoRI |Restriction endonuclease EcoRI |Escherichia coli [TaxId: 562]
 d2oxva_ :    (GLY93)  (HIS225)   [view usage] : c.52.1.1 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease EcoRI |automated matches |Escherichia coli [TaxId: 562]
 d1qria_ :    (VAL95)  (HIS225)   [view usage] : c.52.1.1 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease EcoRI |Restriction endonuclease EcoRI |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.52