Protein Concepts Dictionary

Tableau information

Concept source:  d3b2ub1  amino acid (a.a.) range (THR339)(SER440)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EEHHEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (THR339)  (GLY343) E1
	  (GLY343)  (PRO349) E2
	  (PRO349)  (GLY354) H3
	  (PRO365)  (LEU371) H4
	  (LYS375)  (GLY379) E5
	  (GLY379)  (ALA385) E6
	  (GLU400)  (GLY404) E7
	  (SER413)  (SER418) E8
	  (LYS430)  (ASP434) E9
	  (ASP436)  (SER440) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
E2       86.4°   E2                                                             
H3      110.4°  -60.5°   H3                                                      
H4      -98.4° -162.5°  131.4°   H4                                               
E5       -4.7°  -91.1°  112.2°   94.2°   E5                                        
E6       91.6°    5.3°  -57.6° -161.1°   96.3°   E6                                 
E7      -10.2°  -94.8°  109.9°   92.0°   -6.2°  -99.9°   E7                          
E8       94.3°    8.5°  -60.4° -156.2°   99.0°    4.9°  103.0°   E8                   
E9      -14.6°  -98.1°  108.7°   89.7°  -10.7° -103.1°   -4.5° -106.4°   E9            
E10      95.5°    9.2°  -57.9° -157.3°  100.2°    4.3°  104.0°    2.5°  107.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3p0ya1 :   (THR339)  (SER440)   [view usage] : c.10.2.5 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |L domain |EGF receptor extracellular domain |Human (Homo sapiens) [TaxId: 9606]
 d3b2ui1 :   (THR339)  (SER440)   [view usage] : c.10.2.5 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |L domain |EGF receptor extracellular domain |Human (Homo sapiens) [TaxId: 9606]
 d1ivoa2 :   (THR339)  (SER440)   [view usage] : c.10.2.5 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |L domain |EGF receptor extracellular domain |Human (Homo sapiens) [TaxId: 9606]
 d3b2ub1 :   (THR339)  (SER440)   [view usage] : c.10.2.5 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |L domain |EGF receptor extracellular domain |Human (Homo sapiens) [TaxId: 9606]
 d4krla1 :   (THR339)  (SER440)   [view usage] : c.10.2.5 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |L domain |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.10