Protein Concepts Dictionary

Tableau information

Concept source:  d4ntnb_  amino acid (a.a.) range (SER3)(GLY120)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EEHEHHHHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (SER3)   (GLU13) E1
	   (ALA14)   (HIS20) E2
	   (HIS25)   (LEU30) H3
	   (LEU30)   (GLY43) E4
	   (ASP54)   (PHE62) H5
	   (LYS63)   (LEU69) H6
	   (ILE77)   (GLU81) H7
	   (THR84)  (PRO101) H8
	  (ALA105)  (THR111) E9
	  (ALA114)  (GLY120) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
E2      -95.9°   E2                                                             
H3       65.8° -127.5°   H3                                                      
E4      161.1°   97.9°  -95.5°   E4                                               
H5      -46.7°   58.2°  -76.5°  134.4°   H5                                        
H6      -32.3°   72.0°   97.8°  166.6°  -47.9°   H6                                 
H7      -92.8°  -26.1° -147.5°  105.2°   71.0°  -61.8°   H7                          
H8      121.3°  122.2°   55.7°  -39.9°  117.0°  153.4°  140.8°   H8                   
E9      -33.8°  -93.0°   94.3°  156.5°  -68.9°  -24.0°  -76.6°  142.6°   E9            
E10     129.7°   82.1°  -76.0°  -40.8°   94.5°  141.7°  103.8°  -40.3°  162.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3qn9b_ :     (THR4)  (GLY120)   [view usage] : d.96.1.0 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |automated matches |automated matches |Escherichia coli [TaxId: 469008]
 d4ntme_ :     (SER3)  (GLY120)   [view usage] : d.96.1.0 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |automated matches |automated matches |Escherichia coli [TaxId: 469008]
 d4ntke_ :     (SER3)  (GLY120)   [view usage] : d.96.1.0 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |automated matches |automated matches |Escherichia coli [TaxId: 469008]
 d4ntnb_ :     (SER3)  (GLY120)   [view usage] : d.96.1.0 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |automated matches |automated matches |Escherichia coli [TaxId: 469008]
 d4ntne_ :     (SER3)  (GLY120)   [view usage] : d.96.1.0 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |automated matches |automated matches |Escherichia coli [TaxId: 469008]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.96