Protein Concepts Dictionary

Tableau information

Concept source:  d2j9fb2  amino acid (a.a.) range (SER211)(TYR342)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EEHEHEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER211)  (GLN217) E1
	  (VAL222)  (ALA226) E2
	  (GLN230)  (GLY246) H3
	  (GLY246)  (THR256) E4
	  (ASP263)  (GLY273) H5
	  (GLY273)  (HIS279) E6
	  (PHE287)  (GLU298) H7
	  (ILE307)  (CYS311) E8
	  (PHE321)  (ILE326) H9
	  (TRP330)  (TYR342) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
E2      128.5°   E2                                                             
H3      -32.7°  159.2°   H3                                                      
E4      155.6°  -30.7°  170.1°   E4                                               
H5       35.1° -152.3°   11.1° -168.6°   H5                                        
E6      111.4°  -20.8°  138.9°  -50.8°  131.5°   E6                                 
H7      -80.7°  146.7°  -53.8°  116.5°  -60.8°  167.3°   H7                          
E8       98.7°  -31.8°  127.4°  -62.4°  121.4°  -12.8°  174.6°   E8                   
H9      -92.9°  133.3°  -67.2°  103.2°  -74.2°  153.9°   13.5° -163.9°   H9            
H10     -81.3°  150.2°  -49.5°  120.8°  -52.7°  160.7°  -18.7°  166.6°  -27.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1qs0b2 :   (ASP212)  (GLU338)   [view usage] : c.48.1.2 |TK C-terminal domain-like |TK C-terminal domain-like |Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain |2-oxoisovalerate dehydrogenase E1b, C-domain |Pseudomonas putida [TaxId: 303]
 d2bp7b2 :   (ASP212)  (GLU338)   [view usage] : c.48.1.2 |TK C-terminal domain-like |TK C-terminal domain-like |Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain |automated matches |Pseudomonas putida [TaxId: 303]
 d1dtwb2 :   (GLN217)  (TYR342)   [view usage] : c.48.1.2 |TK C-terminal domain-like |TK C-terminal domain-like |Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain |Branched-chain alpha-keto acid dehydrogenase |Human (Homo sapiens) [TaxId: 9606]
 d1um9b2 :   (GLY194)  (TYR324)   [view usage] : c.48.1.2 |TK C-terminal domain-like |TK C-terminal domain-like |Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain |Branched-chain alpha-keto acid dehydrogenase |Thermus thermophilus [TaxId: 274]
 d1w85b2 :   (GLY193)  (ASN323)   [view usage] : c.48.1.2 |TK C-terminal domain-like |TK C-terminal domain-like |Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain |Pyruvate dehydrogenase E1-beta, PdhB, C-terminal domain |Bacillus stearothermophilus [TaxId: 1422]
 d3exeb2 :   (GLY196)  (LEU327)   [view usage] : c.48.1.2 |TK C-terminal domain-like |TK C-terminal domain-like |Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain |E1-beta subunit of pyruvate dehydrogenase, C-domain |Human (Homo sapiens) [TaxId: 9606]
 d3dufb2 :   (GLY193)  (PHE324)   [view usage] : c.48.1.0 |TK C-terminal domain-like |TK C-terminal domain-like |automated matches |automated matches |Bacillus stearothermophilus [TaxId: 1422]
 d2ozlb2 :   (GLY196)  (LEU327)   [view usage] : c.48.1.2 |TK C-terminal domain-like |TK C-terminal domain-like |Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain |E1-beta subunit of pyruvate dehydrogenase, C-domain |Human (Homo sapiens) [TaxId: 9606]
 d2j9fb2 :   (SER211)  (TYR342)   [view usage] : c.48.1.0 |TK C-terminal domain-like |TK C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ni4b2 :   (GLY196)  (LEU327)   [view usage] : c.48.1.2 |TK C-terminal domain-like |TK C-terminal domain-like |Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain |E1-beta subunit of pyruvate dehydrogenase, C-domain |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.48