Protein Concepts Dictionary

Tableau information

Concept source:  d4nmjf_  amino acid (a.a.) range (ASN362)(ARG480)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EEHEHEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASN362)  (ASP371) E1
	  (VAL387)  (VAL392) E2
	  (ASP396)  (ASP405) H3
	  (LEU410)  (THR416) E4
	  (ASN418)  (VAL429) H5
	  (GLY432)  (ASN437) E6
	  (VAL447)  (LYS453) E7
	  (VAL457)  (GLY462) E8
	  (GLU463)  (THR469) H9
	  (THR469)  (ARG480) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
E2      -18.4°   E2                                                             
H3      138.6°  153.5°   H3                                                      
E4      -55.9°  -43.0°  163.1°   E4                                               
H5      111.7°  127.1°  -26.9°  165.2°   H5                                        
E6      -79.3°  -67.3°  139.0°  -24.3°  160.8°   E6                                 
E7       61.0°   79.4°  -83.1°  103.8°   61.4° -115.9°   E7                          
E8     -120.7° -102.3°   97.7°  -73.4° -121.4°   58.8°  172.3°   E8                   
H9      100.0°  113.9°  -39.6°  155.9°  -14.2° -172.2°   57.9° -126.8°   H9            
E10     -80.4°   75.1°  -90.6°  102.1°  -82.1°  116.0° -105.1°   82.6°  -71.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3u4jd_ :   (PRO384)  (GLY497)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Rhizobium meliloti (Sinorhizobium meliloti) [TaxId: 382]
 d2d4ec_ :   (ASN390)  (PRO504)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Thermus thermophilus [TaxId: 300852]
 d2o2pa_ :   (GLY783)  (TYR902)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4nmka_ :   (ASN362)  (ARG480)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pyrobaculum sp. [TaxId: 1104324]
 d4h73a_ :   (ASN362)  (ARG480)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pyrobaculum sp. [TaxId: 1104324]
 d4i3xc_ :   (ILE370)  (PRO483)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
 d3u4ja_ :   (PRO384)  (GLY497)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Rhizobium meliloti (Sinorhizobium meliloti) [TaxId: 382]
 d4i3ua_ :   (ILE370)  (PRO483)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
 d4nmjf_ :   (ASN362)  (ARG480)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pyrobaculum sp. [TaxId: 1104324]
 d4h73g_ :   (ASN362)  (ARG480)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pyrobaculum sp. [TaxId: 1104324]
 d2d4ea_ :   (PRO394)  (PRO504)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d4gnza_ :   (GLY783)  (TYR902)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4i3xb_ :   (ILE370)  (PRO483)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
 d4nmjg_ :   (ASN362)  (ARG480)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pyrobaculum sp. [TaxId: 1104324]
 d4nmkc_ :   (ASN362)  (ARG480)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pyrobaculum sp. [TaxId: 1104324]
 d3rhla_ :   (PRO788)  (TYR902)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4h73e_ :   (ASN362)  (ARG480)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pyrobaculum sp. [TaxId: 1104324]
 d4h73b_ :   (ASN362)  (ARG480)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pyrobaculum sp. [TaxId: 1104324]
 d4i3ta_ :   (ILE370)  (PRO483)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
 d1euha_ :   (PRO361)  (ASP473)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Streptococcus mutans [TaxId: 1309]
 d1o9ja_ :   (PRO383)  (MET493)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Elephant shrew (Elephantulus edwardii) [TaxId: 28737]
 d1qi1a_ :   (PRO361)  (VAL471)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Streptococcus mutans [TaxId: 1309]
 d4nmja_ :   (ASN362)  (ARG480)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pyrobaculum sp. [TaxId: 1104324]
 d4i3xa_ :   (ILE370)  (PRO483)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
 d3rhja_ :   (GLY783)  (TYR902)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3u4jb_ :   (LEU380)  (GLY497)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Rhizobium meliloti (Sinorhizobium meliloti) [TaxId: 382]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.82