Tableau information
Concept source: d1vmfa_ amino acid (a.a.) range (LYS2)(THR132)
nSSEs in this Concept: 10
String of secondary struct.elems. (SSEs) defining this concept: EEHEEHHEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS2) (THR7) E1
(ASP12) (THR18) E2
(THR18) (GLY29) H3
(GLY33) (SER39) E4
(THR43) (VAL48) E5
(ASP55) (VAL67) H6
(THR82) (GLY92) H7
(HIS93) (ILE98) E8
(VAL112) (ASP118) E9
(ARG124) (THR132) E10
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 144.7° E2
H3 153.7° -28.0° H3
E4 -33.0° 158.0° 137.6° E4
E5 117.3° -43.4° -70.1° 149.8° E5
H6 -77.8° 137.5° 115.4° -52.9° 136.3° H6
H7 144.3° -30.9° -49.7° -171.1° 27.5° 121.7° H7
E8 135.3° -20.8° -47.5° 166.6° 22.7° 140.1° 18.5° E8
E9 -44.3° 158.0° 131.8° -12.3° 158.1° -41.5° -163.1° -178.2° E9
E10 159.1° -29.6° -39.0° 165.3° -42.4° 113.2° -15.0° -28.1° 152.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1vpha_ : (MET1) (ILE134) [view usage] : d.273.1.1 |YjbQ-like |YjbQ-like |YjbQ-like |Hypothetical protein SSO2532 |Sulfolobus solfataricus [TaxId: 2287]
d1vphb_ : (MET1) (ILE134) [view usage] : d.273.1.1 |YjbQ-like |YjbQ-like |YjbQ-like |Hypothetical protein SSO2532 |Sulfolobus solfataricus [TaxId: 2287]
d1xbfa_ : (VAL4) (ILE131) [view usage] : d.273.1.1 |YjbQ-like |YjbQ-like |YjbQ-like |B.subtilis YugU ortolog CAC0907 |Clostridium acetobutylicum [TaxId: 1488]
d1vmha_ : (VAL4) (ILE131) [view usage] : d.273.1.1 |YjbQ-like |YjbQ-like |YjbQ-like |B.subtilis YugU ortolog CAC0907 |Clostridium acetobutylicum [TaxId: 1488]
d2cu5c_ : (VAL5) (LEU128) [view usage] : d.273.1.0 |YjbQ-like |YjbQ-like |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d1vmfa_ : (LYS2) (THR132) [view usage] : d.273.1.1 |YjbQ-like |YjbQ-like |YjbQ-like |Hypothetical protein BH3498 |Bacillus halodurans [TaxId: 86665]
d1vmfc_ : (LYS2) (THR132) [view usage] : d.273.1.1 |YjbQ-like |YjbQ-like |YjbQ-like |Hypothetical protein BH3498 |Bacillus halodurans [TaxId: 86665]
d1xbfb_ : (VAL4) (LEU133) [view usage] : d.273.1.1 |YjbQ-like |YjbQ-like |YjbQ-like |B.subtilis YugU ortolog CAC0907 |Clostridium acetobutylicum [TaxId: 1488]
d2p6ca_ : (MET1) (GLY136) [view usage] : d.273.1.1 |YjbQ-like |YjbQ-like |YjbQ-like |automated matches |Aquifex aeolicus [TaxId: 224324]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.273