Protein Concepts Dictionary

Tableau information

Concept source:  d3v0wl2  amino acid (a.a.) range (GLY109)(ARG211)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EEHEEEEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY109)  (PRO113) E1
	  (THR114)  (PRO119) E2
	  (SER122)  (GLY128) H3
	  (GLY128)  (ASN137) E4
	  (ASP143)  (LYS149) E5
	  (GLY158)  (THR164) E6
	  (THR172)  (THR182) E7
	  (THR182)  (ARG188) H8
	  (TYR192)  (HIS198) E9
	  (ILE205)  (ARG211) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
E2      -13.6°   E2                                                             
H3      -49.6°  -39.0°   H3                                                      
E4      160.1°  173.4°  147.0°   E4                                               
E5      -18.2°  -29.5°  -55.4°  145.7°   E5                                        
E6      147.8°  147.6°  146.3°  -32.1°  153.7°   E6                                 
E7      -18.8°  -15.3°  -32.4°  164.6°  -24.0°  162.9°   E7                          
H8      -94.7° -106.5° -113.1°   69.3°   77.1°  -96.0°   96.6°   H8                   
E9      170.3°  159.2°  121.2°  -27.3°  158.3°  -41.1°  151.5°   86.4°   E9            
E10     -11.4°  -18.4°  -57.4°  155.3°  -26.8°  136.4°  -29.2°  -99.3°  174.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3ietc2 :   (ALA109)  (CYS213)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1dn0a2 :   (THR110)  (ASN211)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain kappa constant domain, CL-kappa |Human (Homo sapiens) [TaxId: 9606]
 d1g9ml2 :   (THR111)  (ASN212)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain kappa constant domain, CL-kappa |Human (Homo sapiens) [TaxId: 9606]
 d4whtd2 :   (ALA113)  (ARG215)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3aazl2 :   (THR114)  (ARG216)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1yecl2 :   (GLY109)  (ASN212)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain kappa constant domain, CL-kappa |Mouse (Mus musculus) [TaxId: 10090]
 d1f3dj2 :   (ALA109)  (ASN212)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain kappa constant domain, CL-kappa |Mouse (Mus musculus) [TaxId: 10090]
 d1mrcl2 :   (ALA109)  (ARG211)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain kappa constant domain, CL-kappa |Mouse (Mus musculus) [TaxId: 10090]
 d3fmgl2 :   (ALA109)  (ARG211)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1acyl2 :   (ALA109)  (ASN210)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain kappa constant domain, CL-kappa |Mouse (Mus musculus) [TaxId: 10090]
 d3gnml2 :   (ALA114)  (ARG216)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1a8jh2 :   (PRO113)  (PRO212)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain lambda constant domain, CL-lambda |Human (Homo sapiens) [TaxId: 9606]
 d4jvwb_ :   (HIS448)  (LYS554)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1jfql2 :   (ALA109)  (ASN212)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain kappa constant domain, CL-kappa |Mouse (Mus musculus) [TaxId: 10090]
 d1rhha2 :   (THR108)  (GLY211)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain kappa constant domain, CL-kappa |Human (Homo sapiens) [TaxId: 9606]
 d1miml2 :   (THR106)  (ASN207)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain kappa constant domain, CL-kappa |Human (Homo sapiens) [TaxId: 9606]
 d4p3cl2 :   (ALA115)  (ASN218)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d4jfyl2 :   (THR109)  (GLY212)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4a6yl2 :   (PRO112)  (ARG211)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d3phoa2 :   (ALA112)  (ASN213)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d3v0wl2 :   (GLY109)  (ARG211)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d3mlxl2 :   (PRO109)  (THR209)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ikfl2 :   (ALA109)  (ASN210)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain kappa constant domain, CL-kappa |Mouse (Mus musculus) [TaxId: 10090]
 d2dd8l2 :   (PRO110)  (ALA209)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain lambda constant domain, CL-lambda |Human (Homo sapiens) [TaxId: 9606]
 d1ifhl2 :   (ALA109)  (ARG211)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain kappa constant domain, CL-kappa |Mouse (Mus musculus) [TaxId: 10090]
 d1tzgl2 :   (THR109)  (ARG211)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1boga2 :   (ALA109)  (ASN212)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain kappa constant domain, CL-kappa |Mouse (Mus musculus) [TaxId: 10090]
 d1h0da2 :   (ALA108)  (SER205)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain kappa constant domain, CL-kappa |Mouse (Mus musculus) [TaxId: 10090]
 d1egjl2 :   (GLY109)  (ARG211)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain kappa constant domain, CL-kappa |Mouse (Mus musculus) [TaxId: 10090]
 d2g75b2 :   (PRO110)  (PRO209)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain lambda constant domain, CL-lambda |Human (Homo sapiens) [TaxId: 9606]
 d1cfna2 :   (ALA109)  (ASN212)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain kappa constant domain, CL-kappa |Mouse (Mus musculus) [TaxId: 10090]
 d1kc5l2 :   (ALA109)  (ASN212)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain kappa constant domain, CL-kappa |Mouse (Mus musculus) [TaxId: 10090]
 d3ntcl2 :   (THR109)  (ARG211)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2jell2 :   (ALA109)  (ASN212)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain kappa constant domain, CL-kappa |Mouse (Mus musculus) [TaxId: 10090]
 d1c12a2 :   (ALA109)  (ASN210)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain kappa constant domain, CL-kappa |Mouse (Mus musculus) [TaxId: 10090]
 d1mfbl2 :   (PRO112)  (ALA212)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain lambda constant domain, CL-lambda |Mouse (Mus musculus) [TaxId: 10090]
 d1a3rl2 :   (ALA109)  (ASN212)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain kappa constant domain, CL-kappa |Mouse (Mus musculus) [TaxId: 10090]
 d4hwbl2 :   (THR106)  (SER205)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2gfba2 :   (GLY109)  (ASN212)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain kappa constant domain, CL-kappa |Mouse (Mus musculus) [TaxId: 10090]
 d1a0ql2 :   (ALA109)  (ASN212)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain kappa constant domain, CL-kappa |Mouse (Mus musculus) [TaxId: 10090]
 d1mrel2 :   (ALA109)  (ARG211)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain kappa constant domain, CL-kappa |Mouse (Mus musculus) [TaxId: 10090]
 d1cica2 :   (ALA109)  (ASN210)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain kappa constant domain, CL-kappa |Mouse (Mus musculus) [TaxId: 10090]
 d2arja2 :   (ALA109)  (ARG211)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain kappa constant domain, CL-kappa |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3mlwl2 :   (PRO109)  (PRO208)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4jfya2 :   (THR109)  (ARG211)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4odhl2 :   (PRO109)  (PRO208)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3ieta2 :   (ALA109)  (GLU212)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d4i3rl2 :   (THR109)  (ASN210)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3u9pl2 :   (ALA109)  (ASN212)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4jo1l2 :   (ASP109)  (ASN207)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d4lsul2 :   (PRO109)  (PRO208)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2h1pl2 :   (ALA114)  (ASN217)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain kappa constant domain, CL-kappa |Mouse (Mus musculus) [TaxId: 10090]
 d1nc2a2 :   (PRO112)  (PRO211)   [view usage] : b.1.1.2 |Immunoglobulin-like beta-sandwich |Immunoglobulin |C1 set domains (antibody constant domain-like) |Immunoglobulin light chain lambda constant domain, CL-lambda |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   b.1