Protein Concepts Dictionary

Tableau information

Concept source:  d1eaja_  amino acid (a.a.) range (GLU27)(VAL139)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EEHEEEEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLU27)   (ALA32) E1
	   (GLU35)   (LEU45) E2
	   (SER46)   (PRO52) H3
	   (LEU53)   (ASP63) E4
	   (ILE71)   (SER75) E5
	   (ASP77)   (ASP82) E6
	  (ALA103)  (ASN109) E7
	  (GLN111)  (THR117) H8
	  (THR117)  (LYS123) E9
	  (PRO126)  (VAL139) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
E2      160.8°   E2                                                             
H3      -56.2° -114.7°   H3                                                      
E4      -59.4°  139.8°   87.6°   E4                                               
E5      128.0°  -32.9°  -91.8° -169.7°   E5                                        
E6      -43.5°  154.2°   69.3°  -19.6°  160.9°   E6                                 
E7      -23.1°  173.5°   62.4°  -36.9°  149.0°  -20.5°   E7                          
H8     -171.2°   24.6°  132.5°  116.5°  -57.3°  134.2° -153.4°   H8                   
E9      130.6°  -30.5°   91.4°  165.7°   -4.1°  159.4°  150.6°   55.1°   E9            
E10     -30.4°  164.2°  -81.1°  -35.7°  154.1°  -29.6°  -19.8° -142.1°  157.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1kacb_ :    (GLU29)  (VAL141)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Coxsackie virus and adenovirus receptor (Car), domain 1 |Human (Homo sapiens) [TaxId: 9606]
 d2j1kg_ :    (GLU27)  (VAL139)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2j1kv_ :    (GLU26)  (VAL137)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1eajb_ :    (GLU27)  (LYS132)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Coxsackie virus and adenovirus receptor (Car), domain 1 |Human (Homo sapiens) [TaxId: 9606]
 d1eaja_ :    (GLU27)  (VAL139)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Coxsackie virus and adenovirus receptor (Car), domain 1 |Human (Homo sapiens) [TaxId: 9606]
 d1f5wb_ :    (GLU27)  (LYS132)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Coxsackie virus and adenovirus receptor (Car), domain 1 |Human (Homo sapiens) [TaxId: 9606]
 d2j1ka_ :    (GLU26)  (LYS132)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   b.1