Protein Concepts Dictionary

Tableau information

Concept source:  d2gnuh2  amino acid (a.a.) range (ALA86)(ILE216)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EEHEEEEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ALA86)   (ALA91) E1
	   (PHE96)  (GLY102) E2
	  (ASP103)  (GLY108) H3
	  (PRO152)  (CYS156) E4
	  (VAL165)  (ASP170) E5
	  (ARG177)  (LEU183) E6
	  (SER187)  (PRO192) E7
	  (VAL196)  (SER200) E8
	  (ARG202)  (ALA207) E9
	  (SER209)  (ILE216) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
E2      148.7°   E2                                                             
H3     -115.8°   91.7°   H3                                                      
E4       17.6° -134.0°  120.1°   E4                                               
E5      -67.9°  137.5°   47.9°   74.5°   E5                                        
E6      111.6°  -37.1° -125.3°  -98.5°  154.6°   E6                                 
E7      -46.4° -162.0°   81.6°   62.8°  -43.6°  153.1°   E7                          
E8      115.6°  -67.6° -104.3°  125.8° -127.0°   77.1°  -97.7°   E8                   
E9      -45.1° -122.4°   94.9°  -32.9°   60.8° -100.0°   75.1°  158.4°   E9            
H10    -113.3°   82.3°  -30.6°  107.8°   56.3° -105.0°   99.4° -125.8°   75.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1e14h1 :    (ALA86)  (ILE216)   [view usage] : b.41.1.1 |PRC-barrel domain |PRC-barrel domain |Photosynthetic reaction centre, H-chain, cytoplasmic domain |Photosynthetic reaction centre |Rhodobacter sphaeroides [TaxId: 1063]
 d1l9bh1 :    (ALA86)  (ILE216)   [view usage] : b.41.1.1 |PRC-barrel domain |PRC-barrel domain |Photosynthetic reaction centre, H-chain, cytoplasmic domain |Photosynthetic reaction centre |Rhodobacter sphaeroides [TaxId: 1063]
 d1aijh1 :    (ALA86)  (ILE216)   [view usage] : b.41.1.1 |PRC-barrel domain |PRC-barrel domain |Photosynthetic reaction centre, H-chain, cytoplasmic domain |Photosynthetic reaction centre |Rhodobacter sphaeroides [TaxId: 1063]
 d1ogvh1 :    (ALA86)  (ALA245)   [view usage] : b.41.1.1 |PRC-barrel domain |PRC-barrel domain |Photosynthetic reaction centre, H-chain, cytoplasmic domain |Photosynthetic reaction centre |Rhodobacter sphaeroides [TaxId: 1063]
 d2j8dh2 :    (ALA86)  (ALA244)   [view usage] : b.41.1.1 |PRC-barrel domain |PRC-barrel domain |Photosynthetic reaction centre, H-chain, cytoplasmic domain |Photosynthetic reaction centre |Rhodobacter sphaeroides [TaxId: 1063]
 d1aigh1 :    (ALA86)  (ILE216)   [view usage] : b.41.1.1 |PRC-barrel domain |PRC-barrel domain |Photosynthetic reaction centre, H-chain, cytoplasmic domain |Photosynthetic reaction centre |Rhodobacter sphaeroides [TaxId: 1063]
 d2gnuh2 :    (ALA86)  (ILE216)   [view usage] : b.41.1.1 |PRC-barrel domain |PRC-barrel domain |Photosynthetic reaction centre, H-chain, cytoplasmic domain |automated matches |Rhodobacter sphaeroides [TaxId: 1063]
 d2bozh2 :    (ALA86)  (GLY240)   [view usage] : b.41.1.1 |PRC-barrel domain |PRC-barrel domain |Photosynthetic reaction centre, H-chain, cytoplasmic domain |Photosynthetic reaction centre |Rhodobacter sphaeroides [TaxId: 1063]
 d1jh0h1 :    (ALA86)  (ALA244)   [view usage] : b.41.1.1 |PRC-barrel domain |PRC-barrel domain |Photosynthetic reaction centre, H-chain, cytoplasmic domain |Photosynthetic reaction centre |Rhodobacter sphaeroides [TaxId: 1063]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.41