Tableau information
Concept source: d2z1ha_ amino acid (a.a.) range (LYS3)(MET142)
nSSEs in this Concept: 10
String of secondary struct.elems. (SSEs) defining this concept: EEEHEHHHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS3) (CYS13) E1
(PRO19) (ARG29) E2
(GLY30) (THR40) E3
(THR43) (ALA58) H4
(GLU64) (ASP70) E5
(GLN72) (ILE78) H6
(ILE82) (GLY89) H7
(VAL101) (HIS114) H8
(LYS117) (LYS122) E9
(PRO128) (MET142) H10
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 165.7° E2
E3 -26.3° 168.0° E3
H4 158.0° -29.7° 141.0° H4
E5 -23.8° 142.7° -49.0° 161.5° E5
H6 123.7° -67.4° 103.0° -67.0° -130.6° H6
H7 87.4° -106.9° 61.1° -85.2° 109.4° -54.4° H7
H8 -167.1° -1.5° 166.6° 29.0° -143.9° -66.0° -105.5° H8
E9 -37.2° 128.6° -63.4° 147.1° -15.3° -139.9° 124.3° 129.9° E9
H10 -47.1° 141.3° -34.0° 112.3° -69.1° 112.4° 58.1° 140.9° -78.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1f21a_ : (LYS3) (ASN143) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |RNase H (RNase HI) |Escherichia coli [TaxId: 562]
d1lawa_ : (VAL5) (ASN143) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |RNase H (RNase HI) |Escherichia coli [TaxId: 562]
d1jl2a_ : (LYS3) (ASN144) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |RNase H (RNase HI) |synthetic, Escherichia coli/Thermus thermophilus chimera
d1goca_ : (VAL5) (ASN143) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |RNase H (RNase HI) |Escherichia coli [TaxId: 562]
d2e4la_ : (HIS8) (GLU144) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |BH0863-like Ribonuclease H |Shewanella oneidensis [TaxId: 211586]
d1rnha_ : (LYS3) (PRO144) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |RNase H (RNase HI) |Escherichia coli [TaxId: 562]
d1jl1a_ : (ALA10) (ASN143) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |RNase H (RNase HI) |Escherichia coli [TaxId: 562]
d2zqbc_ : (HIS8) (ALA145) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |automated matches |Shewanella oneidensis [TaxId: 70863]
d1goaa_ : (GLU6) (ASN143) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |RNase H (RNase HI) |Escherichia coli [TaxId: 562]
d1kvca_ : (LYS3) (ASN143) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |RNase H (RNase HI) |Escherichia coli [TaxId: 562]
d2z1ia_ : (LYS3) (ASN143) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |automated matches |Escherichia coli [TaxId: 562]
d2z1ga_ : (LYS3) (ASN143) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |automated matches |Escherichia coli [TaxId: 562]
d3p1ga_ : (THR520) (GLU666) [view usage] : c.55.3.0 |Ribonuclease H-like motif |Ribonuclease H-like |automated matches |automated matches |Xenotropic mulv-related virus [TaxId: 438045]
d1wsea1 : (VAL5) (ASN143) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |RNase H (RNase HI) |Escherichia coli [TaxId: 562]
d1rbra_ : (GLN4) (ASN143) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |RNase H (RNase HI) |Escherichia coli [TaxId: 562]
d2zqbd_ : (GLU3) (ALA145) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |automated matches |Shewanella oneidensis [TaxId: 70863]
d1rdaa_ : (GLN4) (ASN143) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |RNase H (RNase HI) |Escherichia coli [TaxId: 562]
d1rbta_ : (VAL5) (ASN143) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |RNase H (RNase HI) |Escherichia coli [TaxId: 562]
d3aa4a_ : (LEU2) (MET142) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |RNase H (RNase HI) |Escherichia coli [TaxId: 562]
d1wsga1 : (LYS3) (ASN143) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |RNase H (RNase HI) |Escherichia coli [TaxId: 562]
d1rbua_ : (GLN4) (ASN143) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |RNase H (RNase HI) |Escherichia coli [TaxId: 562]
d2qkba_ : (VAL140) (LYS282) [view usage] : c.55.3.0 |Ribonuclease H-like motif |Ribonuclease H-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1goba_ : (GLN4) (ASN143) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |RNase H (RNase HI) |Escherichia coli [TaxId: 562]
d1rila_ : (LYS3) (SER143) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |RNase H (RNase HI) |Thermus thermophilus [TaxId: 274]
d2z1ja_ : (LYS3) (LYS143) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |automated matches |Escherichia coli [TaxId: 562]
d1wsjb_ : (MET1) (ASN143) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |RNase H (RNase HI) |Escherichia coli [TaxId: 562]
d1jxba_ : (LYS3) (ASN143) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |RNase H (RNase HI) |Escherichia coli [TaxId: 562]
d3aa3a_ : (VAL5) (ASN143) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |RNase H (RNase HI) |Escherichia coli [TaxId: 562]
d1kvba_ : (LYS3) (ASN143) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |RNase H (RNase HI) |Escherichia coli [TaxId: 562]
d1wsja_ : (MET1) (ASN143) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |RNase H (RNase HI) |Escherichia coli [TaxId: 562]
d1wsfa1 : (LYS3) (ASN143) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |RNase H (RNase HI) |Escherichia coli [TaxId: 562]
d3aa5x_ : (VAL5) (ASN143) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |RNase H (RNase HI) |Escherichia coli [TaxId: 562]
d1kvaa_ : (GLN4) (ASN143) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |RNase H (RNase HI) |Escherichia coli [TaxId: 562]
d1rdba_ : (VAL5) (PRO144) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |RNase H (RNase HI) |Escherichia coli [TaxId: 562]
d2z1ha_ : (LYS3) (MET142) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |automated matches |Escherichia coli [TaxId: 562]
d1lava_ : (GLN4) (ASN143) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |RNase H (RNase HI) |Escherichia coli [TaxId: 562]
d3aa2a_ : (GLN4) (ASN143) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2yv0x_ : (VAL5) (ASN143) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |BH0863-like Ribonuclease H |Escherichia coli [TaxId: 562]
d1rbva_ : (GLN4) (ASN143) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |RNase H (RNase HI) |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.55