Protein Concepts Dictionary

Tableau information

Concept source:  d1ga1a_  amino acid (a.a.) range (SER185)(THR345)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EEEHEHHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER185)  (TRP191) E1
	  (ALA200)  (THR209) E2
	  (SER215)  (VAL219) E3
	  (SER245)  (SER251) H4
	  (ASP261)  (ASP265) E5
	  (THR286)  (ASN304) H6
	  (PRO311)  (THR322) H7
	  (VAL326)  (SER331) E8
	  (SER331)  (GLY335) E9
	  (GLY340)  (THR345) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
E2      102.3°   E2                                                             
E3      107.7°  143.2°   E3                                                      
H4      151.7°   53.2° -100.4°   H4                                               
E5       92.1°  -36.8°  120.3°   75.8°   E5                                        
H6      -44.1°   93.2° -123.2°  116.1°  110.3°   H6                                 
H7      130.0°   45.1° -119.6°   23.1°   78.1°   93.5°   H7                          
E8      148.2°   82.3°  -61.0°  -52.2°   72.7°  167.6°  -75.1°   E8                   
E9       94.2°  133.2°  -25.9° -112.9°  100.1° -127.0° -135.7°  -62.6°   E9            
E10     -73.5°  -64.2°  145.0°   81.8°  -94.2°   35.4°   58.8° -133.8°  161.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1ga1a_ :   (SER185)  (THR345)   [view usage] : c.41.1.2 |Subtilisin-like |Subtilisin-like |Serine-carboxyl proteinase, SCP |Serine-carboxyl proteinase, SCP |Pseudomonas sp., sedolisin [TaxId: 306]
 d1ga4a_ :   (SER185)  (THR345)   [view usage] : c.41.1.2 |Subtilisin-like |Subtilisin-like |Serine-carboxyl proteinase, SCP |Serine-carboxyl proteinase, SCP |Pseudomonas sp., sedolisin [TaxId: 306]
 d1kdza_ :   (SER185)  (THR345)   [view usage] : c.41.1.2 |Subtilisin-like |Subtilisin-like |Serine-carboxyl proteinase, SCP |Serine-carboxyl proteinase, SCP |Pseudomonas sp., sedolisin [TaxId: 306]
 d1kdva_ :   (SER185)  (THR345)   [view usage] : c.41.1.2 |Subtilisin-like |Subtilisin-like |Serine-carboxyl proteinase, SCP |Serine-carboxyl proteinase, SCP |Pseudomonas sp., sedolisin [TaxId: 306]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.41