Protein Concepts Dictionary

Tableau information

Concept source:  d2is7a_  amino acid (a.a.) range (SER2)(GLU145)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EEEHEHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (SER2)    (ASN7) E1
	   (ALA10)   (LEU15) E2
	   (LEU15)   (LYS21) E3
	   (PRO23)   (GLY38) H4
	   (HIS41)   (VAL47) E5
	   (ASN50)   (GLN65) H6
	   (LEU72)   (LYS77) E7
	   (GLU84)   (LEU99) H8
	  (ASP105)  (ILE109) E9
	  (LEU138)  (GLU145) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
E2      145.7°   E2                                                             
E3       83.5°  -71.5°   E3                                                      
H4     -101.3°  105.2°  174.5°   H4                                               
E5       60.8°  -91.3°  -22.9° -162.1°   E5                                        
H6     -109.3°  104.8°  142.8°  -33.0° -148.7°   H6                                 
E7       57.3°  -88.6°  -42.6°  142.6°  -28.2° -166.6°   E7                          
H8     -150.6°   61.1°  103.8°  -70.6°  124.9°  -49.0°  143.1°   H8                   
E9       65.9°  -80.0°  -48.5°  136.0°  -39.2°  168.6°  -12.9°  139.3°   E9            
H10    -102.8°  109.4°  118.3°  -58.2°  123.1°  -26.2°  148.8°  -48.5°  161.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4g5da_ :     (ALA7)  (LYS122)   [view usage] : c.1.7.0 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |automated matches |automated matches |Leishmania major [TaxId: 347515]
 d3wg6a_ :     (LYS6)  (GLY135)   [view usage] : c.1.7.0 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |automated matches |automated matches |Candida parapsilosis [TaxId: 5480]
 d2is7a_ :     (SER2)  (GLU145)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |Aldose reductase (aldehyde reductase) |Human (Homo sapiens) [TaxId: 9606]
 d3wg6c_ :     (LYS6)  (GLY135)   [view usage] : c.1.7.0 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |automated matches |automated matches |Candida parapsilosis [TaxId: 5480]
 d2pdba_ :     (SER2)  (GLU145)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |Aldose reductase (aldehyde reductase) |Human (Homo sapiens) [TaxId: 9606]
 d4g5db_ :     (ALA7)  (LYS122)   [view usage] : c.1.7.0 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |automated matches |automated matches |Leishmania major [TaxId: 347515]
 d3mb9a_ :     (SER2)  (GLU145)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |Aldose reductase (aldehyde reductase) |Human (Homo sapiens) [TaxId: 9606]
 d2pdka_ :     (SER2)  (GLU145)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |Aldose reductase (aldehyde reductase) |Human (Homo sapiens) [TaxId: 9606]
 d1z8aa_ :     (SER2)  (GLU145)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1