Tableau information
Concept source: d1e3db_ amino acid (a.a.) range (GLY13)(LEU134)
nSSEs in this Concept: 10
String of secondary struct.elems. (SSEs) defining this concept: EEEEHHHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY13) (PRO19) E1
(HIS26) (GLY35) E2
(LYS39) (ALA45) E3
(THR46) (GLY50) E4
(GLY50) (LYS56) H5
(ASP59) (ARG69) H6
(TYR76) (ILE90) H7
(PRO95) (HIS122) H8
(HIS122) (VAL127) H9
(ASP128) (LEU134) H10
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 163.2° E2
E3 -22.5° 172.8° E3
E4 45.8° -143.6° 39.2° E4
H5 -43.3° 149.4° -31.8° -10.2° H5
H6 120.0° -49.7° 128.5° 165.8° 160.3° H6
H7 -81.9° 107.0° -74.8° -36.8° -43.1° 156.6° H7
H8 125.9° -50.1° 125.4° 161.6° 151.4° 19.4° -149.8° H8
H9 129.5° -36.4° 144.1° -164.2° -171.5° 18.7° 139.5° -33.0° H9
H10 81.7° 81.9° -102.1° 118.3° -121.6° -51.3° 132.8° 69.8° 49.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4kn9l_ : (GLY10) (ILE148) [view usage] : e.18.1.1 |HydB/Nqo4-like |HydB/Nqo4-like |Nickel-iron hydrogenase, large subunit |automated matches |Desulfomicrobium baculatum [TaxId: 525897]
d1cc1l_ : (VAL12) (MET181) [view usage] : e.18.1.1 |HydB/Nqo4-like |HydB/Nqo4-like |Nickel-iron hydrogenase, large subunit |Nickel-iron hydrogenase, large subunit |Desulfomicrobium baculatum [TaxId: 899]
d1yrqj_ : (GLY14) (LYS135) [view usage] : e.18.1.1 |HydB/Nqo4-like |HydB/Nqo4-like |Nickel-iron hydrogenase, large subunit |automated matches |Desulfovibrio fructosovorans [TaxId: 878]
d3myrd_ : (ILE1005) (SER1138) [view usage] : e.18.1.0 |HydB/Nqo4-like |HydB/Nqo4-like |automated matches |automated matches |Allochromatium vinosum [TaxId: 1049]
d1frvb_ : (ASN7) (LEU127) [view usage] : e.18.1.1 |HydB/Nqo4-like |HydB/Nqo4-like |Nickel-iron hydrogenase, large subunit |Nickel-iron hydrogenase, large subunit |Desulfovibrio gigas [TaxId: 879]
d1yrqh_ : (THR11) (ALA136) [view usage] : e.18.1.1 |HydB/Nqo4-like |HydB/Nqo4-like |Nickel-iron hydrogenase, large subunit |automated matches |Desulfovibrio fructosovorans [TaxId: 878]
d3curh_ : (GLY14) (ALA136) [view usage] : e.18.1.1 |HydB/Nqo4-like |HydB/Nqo4-like |Nickel-iron hydrogenase, large subunit |automated matches |Desulfovibrio fructosovorans [TaxId: 878]
d3ayxa_ : (ARG17) (LEU138) [view usage] : e.18.1.0 |HydB/Nqo4-like |HydB/Nqo4-like |automated matches |automated matches |Hydrogenovibrio marinus [TaxId: 28885]
d1e3db_ : (GLY13) (LEU134) [view usage] : e.18.1.1 |HydB/Nqo4-like |HydB/Nqo4-like |Nickel-iron hydrogenase, large subunit |Nickel-iron hydrogenase, large subunit |Desulfovibrio desulfuricans [TaxId: 876]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.18