Protein Concepts Dictionary

Tableau information

Concept source:  d1v10a1  amino acid (a.a.) range (LEU5)(ASN130)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EEEEHHEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LEU5)   (LEU10) E1
	   (PRO34)   (ASN39) E2
	   (ARG43)   (ASP54) E3
	   (ALA60)   (TRP65) E4
	   (THR74)   (ASP77) H5
	   (PRO79)   (GLN84) H6
	   (ASN90)  (GLY101) E7
	  (GLY104)  (SER110) E8
	  (THR114)  (GLY119) H9
	  (GLY122)  (ASN130) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
E2     -160.5°   E2                                                             
E3      -12.8° -169.3°   E3                                                      
E4      140.5°  -38.3°  148.7°   E4                                               
H5        9.9° -161.9°   17.2° -132.4°   H5                                        
H6     -130.6°   47.7° -125.8°   85.4° -140.4°   H6                                 
E7      137.3°  -35.2°  148.4°  -12.0° -131.2°   82.7°   E7                          
E8      -37.4°  140.0°  -31.4°  172.8°   46.4°  -94.6°  160.9°   E8                   
H9       91.3° -105.9°   84.6°  -81.6°   83.7°  119.0°  -93.1°  104.7°   H9            
E10     166.8°  -19.8°  170.9°  -26.4° -158.3°   61.0°  -30.2°  155.3°  -86.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1kyaa1 :     (ALA6)  (ASN130)   [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Laccase |Trametes versicolor, laccase 1 [TaxId: 5325]
 d1a65a1 :     (ASP7)  (ASN130)   [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Laccase |Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
 d2qt6a1 :     (ALA6)  (ASN130)   [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Lentinus tigrinus [TaxId: 5365]
 d1v10a1 :     (LEU5)  (ASN130)   [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Laccase |Rigidoporus lignosus [TaxId: 219653]
 d2xyba1 :     (ALA6)  (ASN130)   [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Pycnoporus cinnabarinus [TaxId: 5643]
 d3fpxa1 :     (ALA6)  (ASN130)   [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Trametes hirsuta [TaxId: 5327]
 d1gyca1 :     (ALA6)  (LYS130)   [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Laccase |Trametes versicolor, laccase 2 [TaxId: 5325]
 d1aoza1 :     (SER1)  (PRO123)   [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Ascorbate oxidase |Zucchini (Cucurbita pepo var. medullosa) [TaxId: 3663]
 d4a2da1 :    (ALA45)  (ASN151)   [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Coriolopsis gallica [TaxId: 76126]
 d1hfua1 :    (GLY25)  (ASN130)   [view usage] : b.6.1.3 |Cupredoxin-like |Cupredoxins |Multidomain cupredoxins |Laccase |Inky cap fungus (Coprinus cinereus) [TaxId: 5346]
 d2hrga1 :    (ALA24)  (GLN130)   [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Funalia trogii [TaxId: 76130]
 d3t6va1 :     (THR7)  (ASN131)   [view usage] : b.6.1.0 |Cupredoxin-like |Cupredoxins |automated matches |automated matches |Steccherinum ochraceum [TaxId: 92696]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   b.6