Protein Concepts Dictionary

Tableau information

Concept source:  d3rrla_  amino acid (a.a.) range (ILE142)(GLU217)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EEEEHEEHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ILE142)  (ASP150) E1
	  (ASP150)  (LYS155) E2
	  (TYR157)  (THR161) E3
	  (ASN164)  (LYS169) E4
	  (PHE174)  (MSE180) H5
	  (LYS183)  (VAL189) E6
	  (GLU190)  (PRO194) E7
	  (PRO194)  (ASP199) H8
	  (PRO206)  (GLN211) H9
	  (GLN211)  (GLU217) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
E2      -82.6°   E2                                                             
E3      -54.8° -117.5°   E3                                                      
E4      120.2°   55.7°  173.0°   E4                                               
H5      -73.9° -151.4°  -34.5°  152.1°   H5                                        
E6       71.9°  -12.1° -113.1°   59.9° -144.3°   E6                                 
E7      -73.1°   99.7°  -31.5°  145.8°  -58.3° -101.5°   E7                          
H8      152.4°   70.5° -133.7°   47.9° -129.3°   81.8°  104.7°   H8                   
H9       63.8° -114.7°  -87.2°   94.6°   69.0° -104.0° -118.7°  133.4°   H9            
E10      71.5°  -33.4° -124.1°   49.7°  141.9°  -25.1° -123.3°   88.5°   81.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1o9ld1 :   (ALA202)  (LYS271)   [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Succinate:CoA transferase, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
 d3cdkc_ :   (GLY148)  (LEU217)   [view usage] : c.124.1.0 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
 d3dlxb1 :   (GLY194)  (LYS271)   [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Succinate:CoA transferase, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
 d3cdka_ :   (GLY148)  (LEU217)   [view usage] : c.124.1.0 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
 d4kgba1 :   (LYS189)  (LYS265)   [view usage] : c.124.1.0 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |automated matches |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
 d3oxog1 :   (ALA163)  (LYS232)   [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |automated matches |Pig (Sus scrofa) [TaxId: 9823]
 d3rrla_ :   (ILE142)  (GLU217)   [view usage] : c.124.1.0 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |automated matches |automated matches |Helicobacter pylori [TaxId: 210]
 d1k6db_ :   (GLY138)  (SER216)   [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Acetate:CoA transferase alpha |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 c.124