Protein Concepts Dictionary

Tableau information

Concept source:  d1qqwb_  amino acid (a.a.) range (TYR84)(ASN224)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EEEEEHHHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (TYR84)   (HIS89) E1
	  (GLY104)  (PRO108) E2
	  (ILE109)  (SER114) E3
	  (ARG130)  (PHE136) E4
	  (GLY141)  (GLY147) E5
	  (ASP157)  (LYS169) H6
	  (ASP178)  (ARG189) H7
	  (ARG189)  (SER201) H8
	  (MET212)  (GLY216) E9
	  (PHE220)  (ASN224) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
E2      152.6°   E2                                                             
E3      109.7°   56.1°   E3                                                      
E4      -82.3°  107.6°  162.7°   E4                                               
E5       85.7°  -85.8°  -30.3°  166.6°   E5                                        
H6      134.5°  -58.8°   51.7° -128.1°   58.6°   H6                                 
H7      -20.7°  137.5° -114.9°   72.0°  -98.3° -153.8°   H7                          
H8      103.0° -102.2°  -97.3°   91.8°  -85.1°  -51.3° -120.3°   H8                   
E9      -71.6°   91.9°  113.2°  -57.6°  123.7° -150.7°   50.9°  149.2°   E9            
E10     -60.0°  133.0° -169.7°   25.4° -141.2° -134.6°  -55.7°   85.6°   65.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1qqwa_ :    (TYR84)  (ASN224)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase I |Human (Homo sapiens) [TaxId: 9606]
 d1f4ja_ :    (GLY78)  (ASN224)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase I |Human (Homo sapiens) [TaxId: 9606]
 d1qwma_ :    (GLY59)  (ASN205)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase I |Helicobacter pylori [TaxId: 210]
 d1dgbd_ :    (TYR84)  (ALA225)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase I |Human (Homo sapiens) [TaxId: 9606]
 d1tgua_ :    (TYR83)  (ASN223)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |automated matches |Cow (Bos taurus) [TaxId: 9913]
 d3re8a_ :    (GLY82)  (ASN223)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase I |Cow (Bos taurus) [TaxId: 9913]
 d7cata_ :    (GLY77)  (ASN223)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase I |Cow (Bos taurus) [TaxId: 9913]
 d1qqwb_ :    (TYR84)  (ASN224)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase I |Human (Homo sapiens) [TaxId: 9606]
 d1m7sa_ :    (GLY86)  (ASN226)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase I |Pseudomonas syringae [TaxId: 317]
 d1u5ua_ :    (ILE74)  (LYS203)   [view usage] : e.5.1.2 |Heme-dependent catalase-like |Heme-dependent catalase-like |Allene oxide synthase |Allene oxide synthase-lipoxygenase protein, N-terminal domain |Black sea rod (Plexaura homomalla) [TaxId: 47982]
 d1dgba_ :    (TYR84)  (ASN224)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase I |Human (Homo sapiens) [TaxId: 9606]
 d1f4jb_ :    (TYR84)  (ASN224)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase I |Human (Homo sapiens) [TaxId: 9606]
 d1si8a_ :    (GLY57)  (ASN203)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase I |Enterococcus faecalis [TaxId: 1351]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   e.5