Protein Concepts Dictionary

Tableau information

Concept source:  d2i1yb_  amino acid (a.a.) range (GLY828)(ALA976)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EEEEEHEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY828)  (HIS833) E1
	  (VAL834)  (LEU839) E2
	  (VAL840)  (CYS846) E3
	  (ASP848)  (ASN858) E4
	  (GLN862)  (SER874) E5
	  (ARG885)  (CYS897) H6
	  (ILE905)  (SER910) E7
	  (ARG915)  (GLY932) H8
	  (ILE938)  (ASP947) H9
	  (SER955)  (ALA976) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
E2      158.8°   E2                                                             
E3      113.0°  -46.4°   E3                                                      
E4      -56.4°  143.3°  168.1°   E4                                               
E5      110.8°  -51.7°  -17.3°  163.2°   E5                                        
H6      -70.8°  123.9°  151.9°  -25.5° -169.2°   H6                                 
E7       89.1°  -86.3°  -67.3°  115.2°  -50.2°  140.3°   E7                          
H8      -99.8°   75.9°   85.1°  -91.3°  102.3°  -67.0°  152.3°   H8                   
H9       53.6° -146.2° -151.0°   29.5° -135.3°   54.7°  -85.8°  120.7°   H9            
H10    -128.9°   55.8°   88.1°  -95.1°  101.7°  -70.6°  141.3°  -33.4°  120.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1fpra_ :   (GLY371)  (GLU526)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Human (Homo sapiens), shp-1 [TaxId: 9606]
 d1wcha_ :  (LYS2329) (GLU2476)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |Tyrosine-protein phosphatase, non-receptor type 13 (PTPL1) |Human (Homo sapiens) [TaxId: 9606]
 d4az1b_ :   (SER140)  (VAL279)   [view usage] : c.45.1.0 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
 d4bpca2 :  (ARG1798) (SER1942)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3h2xa_ :   (GLN150)  (PRO270)   [view usage] : c.45.1.0 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3sr9a2 :  (ARG1757) (SER1901)   [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d2p6xb_ :   (MET149)  (ARG298)   [view usage] : c.45.1.0 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.45