Protein Concepts Dictionary

Tableau information

Concept source:  d2nrba2  amino acid (a.a.) range (GLN156)(LYS232)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: EEEEEHEHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLN156)  (GLU162) E1
	  (ALA163)  (ASP167) E2
	  (ASP167)  (LYS172) E3
	  (TRP174)  (GLN178) E4
	  (GLY180)  (LYS186) E5
	  (ASN192)  (ALA198) H6
	  (GLU200)  (VAL206) E7
	  (ASP211)  (ALA216) H8
	  (PRO223)  (HIS228) H9
	  (HIS228)  (LYS232) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                    
E2       19.1°   E2                                                             
E3      104.9°   87.8°   E3                                                      
E4      -49.6°  -62.4° -107.5°   E4                                               
E5      135.9°  118.7°   55.2°  161.4°   E5                                        
H6      -54.9°  -73.9° -152.0°  -45.3°  152.6°   H6                                 
E7       94.4°   76.7°  -11.8° -105.2°   59.5° -146.0°   E7                          
H8     -174.8°  166.1°   79.5° -126.8°   48.8° -120.0°   90.2°   H8                   
H9       51.5°  -53.3° -118.3°  -94.8°   99.9°   67.0° -107.5°  128.9°   H9            
E10      85.5°   66.4°  -30.4° -112.0°   57.7°  140.3°  -20.1°   99.7°   87.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2nrba2 :   (GLN156)  (LYS232)   [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Succinate:CoA transferase, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
 d1opea2 :   (GLN156)  (LYS232)   [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Succinate:CoA transferase, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
 d1o9la1 :   (GLN195)  (LYS271)   [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Succinate:CoA transferase, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
 d2nrca2 :   (LYS146)  (LYS232)   [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Succinate:CoA transferase, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
 d1o9lc1 :   (GLN195)  (LYS271)   [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Succinate:CoA transferase, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
 d2nrbb2 :   (GLN156)  (LYS232)   [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Succinate:CoA transferase, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
 d1ooyb2 :   (GLN156)  (LYS232)   [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Succinate:CoA transferase, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
 d1ooya2 :   (GLU149)  (LYS232)   [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Succinate:CoA transferase, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
 d3dlxa1 :   (GLU188)  (LYS271)   [view usage] : c.124.1.2 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase alpha subunit-like |Succinate:CoA transferase, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 c.124